On 19. des. 2011, at 19:46, Mark Miller wrote:

> Hmm. Never thought of this before but one of the first things that comes
> to mind is whether rsync supports 'diffing' of HDF5 binary, compressed,
> chunked files?
> 
> My naive understanding of tools like rsync is that they come
> pre-packaged with the ability to diff ascii text files but not binary
> files of any kind.

It looks like you're wrong. Proof by Wikipedia:
"Unlike diff, the process of creating a delta file has two steps: first a 
signature file is created from file A, and then this (relatively small) 
signature and file B are used to create the delta file. Also unlike diff, rdiff 
works well with binary files."
https://en.wikipedia.org/wiki/Rsync

Compression might screw with that, though. An idea is to use rsync compression 
instead, and leave the hdf5 files uncompressed. From man rsync:
  -z, --compress              compress file data during the transfer

Cheers
Paul


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