>lun. 20 juil. 2026 at 13:53, Mattia Bunel via <[email protected]> wrote:
> Hello, > > I'm currently using Guix to package scientific articles from the > scientific journal Rzine (https://rzine.fr/). These articles were > written using RMarkdown. > > I was able to build a functional manifest (i.e., one that works with a > recent commit), but when I try to build it in the original context > (circa 2023), I get the following error : I run it and got the following, does it make sense to you ? ❯ guix time-machine -C channels.scm -- shell -m manifest.scm channels.scm:12:1: warning: channel 'guix-cran' lacks an introduction and cannot be authenticated /home/csantos/.config/guix/current/share/guile/site/3.0/guix/platforms/loongarch.scm:25:2: warning: extraneous field initializers (rust-target) substitute: looking for substitutes on 'https://bordeaux.guix.gnu.org'... 100.0% substitute: looking for substitutes on 'https://ci.guix.gnu.org'... 100.0% The following derivation will be built: /gnu/store/i839q34f5djwn7api9jx33qs2z9a8xhf-rzine-documentation-1.0-1.1b52ccf.drv building /gnu/store/i839q34f5djwn7api9jx33qs2z9a8xhf-rzine-documentation-1.0-1.1b52ccf.drv... | 'build' phasebuilder for `/gnu/store/i839q34f5djwn7api9jx33qs2z9a8xhf-rzine-documentation-1.0-1.1b52ccf.drv' failed with exit code 1 build of /gnu/store/i839q34f5djwn7api9jx33qs2z9a8xhf-rzine-documentation-1.0-1.1b52ccf.drv failed View build log at '/var/log/guix/drvs/i8/39q34f5djwn7api9jx33qs2z9a8xhf-rzine-documentation-1.0-1.1b52ccf.drv.gz'. guix shell: error: build of `/gnu/store/i839q34f5djwn7api9jx33qs2z9a8xhf-rzine-documentation-1.0-1.1b52ccf.drv' failed With: 22 │ Error in loadNamespace(x) : there is no package called ‘rzine’ 23 │ Calls: render ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart 24 │ Execution halted 25 │ error: in phase 'build': uncaught exception: 26 │ %exception #<&invoke-error program: "R" arguments: ("-e" "library(rmarkdown); render(\"index.Rmd\")") exit-status: 1 term-signal: #f stop-signal: #f> 27 │ phase `build' failed after 0.3 seconds 28 │ command "R" "-e" "library(rmarkdown); render(\"index.Rmd\")" failed with status 1starting phase `build' 29 │ 30 │ R version 4.2.2 (2022-10-31) -- "Innocent and Trusting" 31 │ Copyright (C) 2022 The R Foundation for Statistical Computing 32 │ Platform: x86_64-unknown-linux-gnu (64-bit) 33 │ 34 │ R is free software and comes with ABSOLUTELY NO WARRANTY. 35 │ You are welcome to redistribute it under certain conditions. 36 │ Type 'license()' or 'licence()' for distribution details. 37 │ 38 │ Natural language support but running in an English locale 39 │ 40 │ R is a collaborative project with many contributors. 41 │ Type 'contributors()' for more information and 42 │ 'citation()' on how to cite R or R packages in publications. 43 │ 44 │ Type 'demo()' for some demos, 'help()' for on-line help, or 45 │ 'help.start()' for an HTML browser interface to help. 46 │ Type 'q()' to quit R. 47 │ 48 │ > library(rmarkdown); render("index.Rmd") 49 │ Error in loadNamespace(x) : there is no package called ‘rzine’ 50 │ Calls: render ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart 51 │ Execution halted 52 │ error: in phase 'build': uncaught exception: 53 │ %exception #<&invoke-error program: "R" arguments: ("-e" "library(rmarkdown); render(\"index.Rmd\")") exit-status: 1 term-signal: #f stop-signal: #f> 54 │ phase `build' failed after 0.3 seconds 55 │ command "R" "-e" "library(rmarkdown); render(\"index.Rmd\")" failed with status 1
signature.asc
Description: PGP signature
