Autopano Pro uses autostitch which can be downloaded and used for free.
However iirc, there are some limitations.

http://cvlab.epfl.ch/~brown/autostitch/autostitch.html

On Fri, 2011-01-14 at 05:57 -0800, Jeffrey Martin wrote:
> "  Does anyone know 
> which control point detector AutoPanoGiga uses?  Is the similar 
> algorithm available in Hugin?"
> 
> It is far superior (in terms of speed and reliability) to anything in
> Hugin as far as I can tell. It does a lot guessing when the "dumb
> automatic" scheme of looking for control points doesn't work
> completely.
> 
> 
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