Hi Ulli, On Thu, 5 Dec 2013, Ullrich Koethe wrote:
> following your instructions, I now installed all dependencies on Linux > (64-bit Ubuntu, gcc 4.7.3). Here is what I got: > > In scifio, maven compiles, but then complains > > Failed tests: testDefaultEnabled(io.scif.filters.utests.FilterTest) Hopefully you will not need to compile SCIFIO yourself anymore soon (I require https://github.com/scifio/scifio/pull/98 or something similar to be merged for that). > In vigra-imglib2 (branch 'wip'), 'mvn install' compiles and produces a > number of compiler warnings which seem to be uncritical on first glance, > but are confusingly flagged as "[ERROR]" in the maven output. Which ones? (Please just paste such errors when you encounter them, of course I could reproduce, if only I had more time!) > When I finally run './avian-run.sh', I get the following output > > java.io.EOFException > at java.util.zip.InflaterInputStream.read (line 54) > at java.util.zip.ZipFile$1.read (line 120) > at java.util.zip.ZipFile$1.read (line 114) > at java.util.zip.InflaterInputStream.read (line 39) > at java.util.zip.ZipFile$1.read (line 106) > at java.util.Properties$InputStreamParser.readCharacter (line 192) > at java.util.Properties$Parser.parse (line 106) > at java.util.Properties.load (line 21) > at net.imglib2.vigra.NarHelper.loadLibrary (line 41) > at net.imglib2.vigra.VigraImg3DUnsignedByte.<clinit> (line 23) > at net.imglib2.vigra.VigraImgFactory3DUnsignedByte.create (line 19) > at net.imglib2.vigra.VigraImgFactory3DUnsignedByte.create (line 14) > at io.scif.img.ImgOpener.openImg (line 301) > at io.scif.img.ImgOpener.openImg (line 217) > at io.scif.img.ImgOpener.openImg (line 200) > at Example.main (line 34) > at Example.main (line 22) > java.lang.ExceptionInInitializerError > at net.imglib2.vigra.VigraImgFactory3DUnsignedByte.create (line 19) > at net.imglib2.vigra.VigraImgFactory3DUnsignedByte.create (line 14) > at io.scif.img.ImgOpener.openImg (line 301) > at io.scif.img.ImgOpener.openImg (line 217) > at io.scif.img.ImgOpener.openImg (line 200) > at Example.main (line 34) > at Example.main (line 22) > caused by: java.lang.UnsatisfiedLinkError: Could not find native library I will make that error message more informative. Thanks for testing. Hopefully I will be able to set aside time to work on this project next week. Ciao, Dscho _______________________________________________ ImageJ-devel mailing list ImageJ-devel@imagej.net http://imagej.net/mailman/listinfo/imagej-devel
