Hi again,

I tried also with the set of jars I got with the maven and the pom.xml I sent earlier:

export CLASSPATH=`find /home/hajaalin/Software/mvn-IJ2/target/dependency -name '*.jar' |sed ':a;N;$!ba;s/\n/:/g'` jython /home/hajaalin/Software/fiji-20140219/Fiji.app/macros/imglib1.py /home/hajaalin/Data/Misha/composite1.ome.tif

Now there are no errors and I get directly the Java elf, but still no image.

Harri

--
__________________________________________________
Harri Jäälinoja
Light Microscopy Unit
Institute of Biotechnology, University of Helsinki
http://www.biocenter.helsinki.fi/bi/lmu/
+358 9 191 59370 fax +358 9 191 59366


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