Hi Brian, Thanks for the reports:
> 1. The last couple of days when I try to extract the Fiji Linux 64 > continuous release tar file I get an error "truncated gzip input". I can > work around this by downloading the "all platforms" package instead. Hmm, I did not see this problem when I tried just now. Perhaps the download itself is not completing successfully? It should be ~141MB. If it keeps happening, we could add an MD5 sum for verification if that would be helpful. > 2. It seems that the ops service is not getting injected into my jython > scripts. Scripts works fine (ie data and display are injuected) until I try > to call an op. Then I get "ops is not defined". This only happens when > using a Fiji release. If I run imagej2 through a development environment > using maven it works. Yeah, I noticed this same problem the other day, and fixed it on master: https://github.com/scijava/scijava-common/commit/f88984cb587c314c53e06fdce606d4cecf3a4813 Using scijava-common-2.28.0 or later will avoid the issue. Or you can work around it by writing: # @net.imagej.ops.OpService ops Regards, Curtis On Mon, Aug 4, 2014 at 3:32 PM, Brian Northan <bnort...@gmail.com> wrote: > Hi List > > A couple of things... > > 1. The last couple of days when I try to extract the Fiji Linux 64 > continuous release tar file I get an error "truncated gzip input". I can > work around this by downloading the "all platforms" package instead. > > 2. It seems that the ops service is not getting injected into my jython > scripts. Scripts works fine (ie data and display are injuected) until I > try to call an op. Then I get "ops is not defined". This only happens > when using a Fiji release. If I run imagej2 through a development > environment using maven it works. > > Thanks, an example script is below > > Brian > > # @DatasetService data > # @DisplayService display > # @OpService ops > > # define a local directory to get the images from > directory="/home/bnorthan/Brian2014/Images/TempForEasyAccess/" > > # use 2-channels of the lena image for test image > image1Name="lena_red.tif" > image2Name="lena_green.tif" > > # open first image > image1=data.open(directory+image1Name) > display.createDisplay(image1.getName(), image1); > > # open second image > image2=data.open(directory+image2Name) > display.createDisplay(image2.getName(), image2); > > # add the images > image3 = ops.add(image1,image2) > display.createDisplay(image3.getName(), image3) > > > > > _______________________________________________ > ImageJ-devel mailing list > ImageJ-devel@imagej.net > http://imagej.net/mailman/listinfo/imagej-devel > >
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