Hi Christian I hope you had a nice holiday. Are you back now??
I found some example KNIME workflows for imagej/imagej2 integration here https://tech.knime.org/community/imagej . The problem is that I cannot find the 'ImageJ Macro' or the 'Image2 integration' nodes. I searched for 'imagej' in the node repository and explored the community nodes. I also looked for them using "Install KNIME extensions...", but couldn't find anything imagej related. Any suggestions?? Thanks Brian On Thu, Aug 20, 2015 at 10:50 AM, JAY W WARRICK <warr...@wisc.edu> wrote: > It happens that I just put that in my calendar to try and attend (at least > what I can fit in). Cool. > > J > > On Aug 20, 2015, at 9:47 AM, Curtis Rueden <ctrue...@wisc.edu> wrote: > > Hi Jay, > > Christian will not be at the IJ conference (conflict with another > conference), but will be at the hackathon afterward. > > Regards, > Curtis > On Aug 20, 2015 9:42 AM, "JAY W WARRICK" <warr...@wisc.edu> wrote: > >> I'd be interested in keeping up with this conversation. We do the same >> thing in JEX to expose ImageJ commands (that are headless and have a menu >> path) as functions. Exposing some Ops would be great too. Will you be at >> the imagej conference that I could pick your brain on related questions? >> >> Cheers, >> >> Jay >> >> On Aug 19, 2015, at 2:19 PM, Christian Dietz < >> christian.di...@uni-konstanz.de> wrote: >> >> Sorry, I was not really precise: all Commands which are declared as >> headless and have a menu path. >> >> And yes: like this we could select the ops which are exposed as nodes. >> Am 19.08.2015 8:00 nachm. schrieb Curtis Rueden <ctrue...@wisc.edu>: >> >> Hi Christian, >> >> > currently, we can automatically create nodes from Commands and not >> > from ops. >> >> But all Ops are Commands...? >> >> > From a technical point of view it would be easy to adapt this >> > mechanism to Ops, but I am not sure if we want that (as you dont want >> > to create a node for each and every atomar op). I hope we will >> > find a nice strategy when to expose an Op as a KNIME node. >> >> Possible solutions: >> * Expose all Commands (including Ops) that declare a menu path. >> * Expose Commands which have (or do not have) a particular attribute key. >> We use this for ImageJ1, adding a "no-legacy" attribute for commands which >> should not be exposed from the legacy ImageJ1 user interface. >> >> Regards, >> Curtis >> >> On Wed, Aug 19, 2015 at 12:36 PM, Christian Dietz < >> christian.di...@uni-konstanz.de> wrote: >> >> Hi Brian, >> >> currently, we can automatically create nodes from Commands and not from >> ops. From a technical point of view it would be easy to adapt this >> mechanism to Ops, but I am not sure if we want that (as you dont want to >> create a node for each and every atomar op). I hope we will find a nice >> strategy when to expose an Op as a KNIME node. >> >> Anyway, Commands can be installed if the imagej2 extension is also >> installed within KNIME. I can send you more details next Monday, when I'm >> back from vacation. >> >> Hope this helps, >> >> Christian >> >> Am 19.08.2015 5:58 nachm. schrieb Brian Northan <bnort...@gmail.com>: >> > >> > Hi >> > >> > I have a question for the KNIME folks. >> > >> > My understanding is that KNIME can auto-generate a node for every class >> that implements an op. Is this correct?? And if so does the current >> release of KNIME recognize ops?? Or do I need a development version?? >> > >> > How does one install an op to KNIME?? Do you just place the .jar file >> in a certain directory?? Or do you have to go through the 'install KNIME >> extensions' option?? Or something else?? >> > >> > Thanks >> > >> > Brian >> _______________________________________________ >> ImageJ-devel mailing list >> ImageJ-devel@imagej.net >> http://imagej.net/mailman/listinfo/imagej-devel >> >> >> _______________________________________________ >> ImageJ-devel mailing list >> ImageJ-devel@imagej.net >> http://imagej.net/mailman/listinfo/imagej-devel >> >> >> > _______________________________________________ > ImageJ-devel mailing list > ImageJ-devel@imagej.net > http://imagej.net/mailman/listinfo/imagej-devel > >
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