Hi Brian, The ImageJ2 Extension of KNIME is not part of the "Trusted Community Nodes", and therefore not visible directly in the "Trusted Community Contributions" Update-Site, as some testing workflows are missing and there will be some refactoring before it's considered as "trusted". However, you can install it via the "Stable" or "Nightly" update-sites of the KNIME Community Contributions (see "Step 2.2" in https://tech.knime.org/wiki/install-knime-image-processing and https://tech.knime.org/wiki/knime-image-processing-nightly-build ).
Let me know if you need further help. Christian On Mo, 2015-08-24 at 17:04 -0400, Brian Northan wrote: > Hi Christian > > > I hope you had a nice holiday. Are you back now?? > > > I found some example KNIME workflows for imagej/imagej2 integration > here https://tech.knime.org/community/imagej > . > > The problem is that I cannot find the 'ImageJ Macro' or the 'Image2 > integration' nodes. I searched for 'imagej' in the node repository > and explored the community nodes. I also looked for them using > "Install KNIME extensions...", but couldn't find anything imagej > related. > > > Any suggestions?? > > > Thanks > > > Brian > > > On Thu, Aug 20, 2015 at 10:50 AM, JAY W WARRICK <warr...@wisc.edu> > wrote: > It happens that I just put that in my calendar to try and > attend (at least what I can fit in). Cool. > > J > > On Aug 20, 2015, at 9:47 AM, Curtis Rueden <ctrue...@wisc.edu> > wrote: > > > > Hi Jay, > > > > Christian will not be at the IJ conference (conflict with > > another conference), but will be at the hackathon afterward. > > > > Regards, > > Curtis > > > > On Aug 20, 2015 9:42 AM, "JAY W WARRICK" <warr...@wisc.edu> > > wrote: > > I'd be interested in keeping up with this > > conversation. We do the same thing in JEX to expose > > ImageJ commands (that are headless and have a menu > > path) as functions. Exposing some Ops would be great > > too. Will you be at the imagej conference that I > > could pick your brain on related questions? > > > > > > Cheers, > > > > > > Jay > > > > > On Aug 19, 2015, at 2:19 PM, Christian Dietz > > > <christian.di...@uni-konstanz.de> wrote: > > > > > > Sorry, I was not really precise: all Commands > > > which are declared as headless and have a menu > > > path. > > > > > > And yes: like this we could select the ops which > > > are exposed as nodes. > > > > > > Am 19.08.2015 8:00 nachm. schrieb Curtis Rueden > > > <ctrue...@wisc.edu>: > > > Hi Christian, > > > > > > > > > > currently, we can automatically create > > > nodes from Commands and not > > > > from ops. > > > > > > > > > But all Ops are Commands...? > > > > > > > > > > From a technical point of view it would > > > be easy to adapt this > > > > mechanism to Ops, but I am not sure if > > > we want that (as you dont want > > > > to create a node for each and every > > > atomar op). I hope we will > > > > find a nice strategy when to expose an > > > Op as a KNIME node. > > > > > > > > > Possible solutions: > > > * Expose all Commands (including Ops) that > > > declare a menu path. > > > * Expose Commands which have (or do not > > > have) a particular attribute key. We use > > > this for ImageJ1, adding a "no-legacy" > > > attribute for commands which should not be > > > exposed from the legacy ImageJ1 user > > > interface. > > > > > > > > > Regards, > > > Curtis > > > > > > On Wed, Aug 19, 2015 at 12:36 PM, > > > Christian Dietz > > > <christian.di...@uni-konstanz.de> wrote: > > > Hi Brian, > > > > > > currently, we can automatically > > > create nodes from Commands and not > > > from ops. From a technical point > > > of view it would be easy to adapt > > > this mechanism to Ops, but I am > > > not sure if we want that (as you > > > dont want to create a node for > > > each and every atomar op). I hope > > > we will find a nice strategy when > > > to expose an Op as a KNIME node. > > > > > > Anyway, Commands can be installed > > > if the imagej2 extension is also > > > installed within KNIME. I can send > > > you more details next Monday, when > > > I'm back from vacation. > > > > > > Hope this helps, > > > > > > Christian > > > > > > Am 19.08.2015 5:58 nachm. schrieb > > > Brian Northan > > > <bnort...@gmail.com>: > > > > > > > > Hi > > > > > > > > I have a question for the KNIME > > > folks. > > > > > > > > My understanding is that KNIME > > > can auto-generate a node for every > > > class that implements an op. Is > > > this correct?? And if so does the > > > current release of KNIME recognize > > > ops?? Or do I need a development > > > version?? > > > > > > > > How does one install an op to > > > KNIME?? Do you just place > > > the .jar file in a certain > > > directory?? Or do you have to go > > > through the 'install KNIME > > > extensions' option?? Or something > > > else?? > > > > > > > > Thanks > > > > > > > > Brian > > > > > > > _______________________________________________ > > > ImageJ-devel mailing list > > > ImageJ-devel@imagej.net > > > > http://imagej.net/mailman/listinfo/imagej-devel > > > > > > > > > _______________________________________________ > > > ImageJ-devel mailing list > > > ImageJ-devel@imagej.net > > > http://imagej.net/mailman/listinfo/imagej-devel > > > > > > > > > _______________________________________________ > ImageJ-devel mailing list > ImageJ-devel@imagej.net > http://imagej.net/mailman/listinfo/imagej-devel > > > > _______________________________________________ > ImageJ-devel mailing list > ImageJ-devel@imagej.net > http://imagej.net/mailman/listinfo/imagej-devel _______________________________________________ ImageJ-devel mailing list ImageJ-devel@imagej.net http://imagej.net/mailman/listinfo/imagej-devel
