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https://issues.apache.org/jira/browse/HBASE-10999?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13973351#comment-13973351
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Vladimir Rodionov commented on HBASE-10999:
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I might be wrong in my assumptions, but it seems that you are doing cross
region RPCs from inside Coprocessors (RegionObservers?). If this is true than
how have you implemented deadlock prevention when all RPC threads on some RS
can be blocked, processing incoming and outgoing requests? This subject (cross
region RPCs from RegionObserver) has been discussed several times in the past
and now is being considered as an anti-pattern.
> Cross-row Transaction : Implement Percolator Algorithm on HBase
> ---------------------------------------------------------------
>
> Key: HBASE-10999
> URL: https://issues.apache.org/jira/browse/HBASE-10999
> Project: HBase
> Issue Type: New Feature
> Components: Transactions/MVCC
> Affects Versions: 0.99.0
> Reporter: cuijianwei
> Assignee: cuijianwei
>
> Cross-row transaction is a desired function for database. It is not easy to
> keep ACID characteristics of cross-row transactions in distribute databases
> such as HBase, because data of cross-transaction might locate in different
> machines. In the paper http://research.google.com/pubs/pub36726.html, google
> presents an algorithm(named percolator) to implement cross-row transactions
> on BigTable. After analyzing the algorithm, we found percolator might also be
> a choice to provide cross-row transaction on HBase. The reasons includes:
> 1. Percolator could keep the ACID of cross-row transaction as described in
> google's paper. Percolator depends on a Global Incremental Timestamp Service
> to define the order of transactions, this is important to keep ACID of
> transaction.
> 2. Percolator algorithm could be totally implemented in client-side. This
> means we do not need to change the logic of server side. Users could easily
> include percolator in their client and adopt percolator APIs only when they
> want cross-row transaction.
> 3. Percolator is a general algorithm which could be implemented based on
> databases providing single-row transaction. Therefore, it is feasible to
> implement percolator on HBase.
> In last few months, we have implemented percolator on HBase, did correctness
> validation, performance test and finally successfully applied this algorithm
> in our production environment. Our works include:
> 1. percolator algorithm implementation on HBase. The current implementations
> includes:
> a). a Transaction module to provides put/delete/get/scan interfaces to do
> cross-row/cross-table transaction.
> b). a Global Incremental Timestamp Server to provide globally
> monotonically increasing timestamp for transaction.
> c). a LockCleaner module to resolve conflict when concurrent transactions
> mutate the same column.
> d). an internal module to implement prewrite/commit/get/scan logic of
> percolator.
> Although percolator logic could be totally implemented in client-side, we
> use coprocessor framework of HBase in our implementation. This is because
> coprocessor could provide percolator-specific Rpc interfaces such as
> prewrite/commit to reduce Rpc rounds and improve efficiency. Another reason
> to use coprocessor is that we want to decouple percolator's code from HBase
> so that users will get clean HBase code if they don't need cross-row
> transactions. In future, we will also explore the concurrent running
> characteristic of coprocessor to do cross-row mutations more efficiently.
> 2. an AccountTransfer simulation program to validate the correctness of
> implementation. This program will distribute initial values in different
> tables, rows and columns in HBase. Each column represents an account. Then,
> configured client threads will be concurrently started to read out a number
> of account values from different tables and rows by percolator's get; after
> this, clients will randomly transfer values among these accounts while
> keeping the sum unchanged, which simulates concurrent cross-table/cross-row
> transactions. To check the correctness of transactions, a checker thread will
> periodically scan account values from all columns, make sure the current
> total value is the same as the initial total value. We run this validation
> program while developing, this help us correct errors of implementation.
> 3. performance evaluation under various test situations. We compared
> percolator's APIs with HBase's with different data size and client thread
> count for single-column transaction which represents the worst performance
> case for percolator. We get the performance comparison result as (below):
> a) For read, the performance of percolator is 90% of HBase;
> b) For write, the performance of percolator is 23% of HBase.
> The drop derives from the overhead of percolator logic, the performance test
> result is similar as the result reported by google's paper.
> 4. Performance improvement. The write performance of percolator decreases
> more compared with HBase. This is because percolator's write needs to read
> data out to check write conflict and needs two Rpcs which do prewriting and
> commiting respectively. We are investigating ways to improve the write
> performance.
> We are glad to share current percolator implementation and hope this could
> provide a choice for users who want cross-row transactions because it does
> not need to change the code and logic of origin HBase. Comments and
> discussions are welcomed.
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