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https://issues.apache.org/jira/browse/HBASE-17712?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15896259#comment-15896259
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Duo Zhang commented on HBASE-17712:
-----------------------------------

Yeah there could still be holes that the RS pauses after writing the compaction 
marker, although it is much rarer than before. Simply adding new checks can not 
solve the problem-long GC can always occurs after your check and before the 
actual deletion.

As we can not remove the storefiles immediately after compaction because it may 
still be read by someone, it is not possible to solve it by atomic operations 
on HDFS. And a possible way is to store the storefile list in meta table, and 
do a checkAndPut when updating it to confirm that the region is still holding 
by us. This could be done in the future, but it is not a easy work as we need 
to deal with region split/merge, flush, etc. So I do not think it is the right 
time to do this as the problem we want to address rarely rarely happens. Maybe 
we could bring this up when we want to put storefiles on a FileSystem that does 
not support listing?

Let me try to solve it by another way describe in HBASE-13651 - reassigning the 
region. It is a little costly and slow but given its possibility, I think it is 
acceptable.

Thanks.

> Remove/Simplify the logic of RegionScannerImpl.handleFileNotFound
> -----------------------------------------------------------------
>
>                 Key: HBASE-17712
>                 URL: https://issues.apache.org/jira/browse/HBASE-17712
>             Project: HBase
>          Issue Type: Bug
>    Affects Versions: 2.0.0, 1.4.0
>            Reporter: Duo Zhang
>            Assignee: Duo Zhang
>             Fix For: 2.0.0, 1.4.0
>
>         Attachments: HBASE-17712.patch, HBASE-17712-ut.patch, 
> HBASE-17712-v1.patch
>
>
> It is introduced in HBASE-13651 and the logic became much more complicated 
> after HBASE-16304 due to a dead lock issue. It is really tough as sequence id 
> is involved in and the method we called is used to serve secondary replica 
> originally which does not handle write.
> In fact, in 1.x release, the problem described in HBASE-13651 is gone. Now we 
> will write a compaction marker to WAL before deleting the compacted files. We 
> can only consider a RS as dead after its WAL files are all closed so if the 
> region has already been reassigned the compaction will fail as we can not 
> write out the compaction marker.
> So theoretically, if we still hit FileNotFound exception, it should be a 
> critical bug which means we may loss data. I do not think it is a good idea 
> to just eat the exception and refresh store files. Or even if we want to do 
> this, we can just refresh store files without dropping memstore contents. 
> This will also simplify the logic a lot.
> Suggestions are welcomed.



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