Nested compile source roots in effective POM cause bad Eclipse build path
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                 Key: MECLIPSE-335
                 URL: http://jira.codehaus.org/browse/MECLIPSE-335
             Project: Maven 2.x Eclipse Plugin
          Issue Type: Bug
    Affects Versions: 2.4
         Environment: Maven 2.0.7, JDK 1.5.0_12, WinXP
            Reporter: Benjamin Bentmann


Source generating plugins like for JavaCC or JFlex usually add their output 
folder to the POM as a compile source root. If these source directories happen 
to be nested, i.e. "src/main/java" and additional something like 
"src/main/java/org/apache", mvn eclipse:eclipse produces the following bad 
.classpath contents with overlapping build paths:{code:xml}
<classpath>
  <classpathentry kind="src" path="src/main/java"/>
  <classpathentry kind="src" path="src/main/java/org/apache"/>
  ...
</classpath>
{code}

While this issues relates to MECLIPSE-114, I really think my problem is caused 
by Maven.

Though the maven-eclipse-plugin causes the problem to manifest itself, it might 
not be the proper place to solve it as it appears to be a more general issue 
(i.e. the Maven Eclipse Integration might also be affected, though I did not 
test this). Surely, each and every plugin developer could be told to check for 
source directory nesting but I consider this an error-prone approach. I would 
rather appreciate either that MavenProject.addCompileSourceRoot() automatically 
ignores nested source directories (if such a general change is acceptable) or 
that new methods in MavenProject are introduced that allow for conditional 
addition of source roots only if they do not nest with existing roots such that 
plugin developers can easily fix the problem.


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