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https://issues.apache.org/jira/browse/SPARK-4267?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14209183#comment-14209183
]
Matthew Daniel commented on SPARK-4267:
---------------------------------------
Apologies, I don't know if we want log verbiage inline or as an attachment.
I experienced this NPE on an EMR cluster, AMI 3.3.0 which is Amazon Hadoop
2.4.0 against a {{make-distribution.sh}} version with {{-Pyarn}} and
{{-Phadoop-2.2}} with {{-Dhadoop.version=2.2.0}}. I built it against 2.2
because some of our jobs run on 2.2, and I thought 2.4 would be backwards
compatible.
I will try building as you said, using {{sbt assembly}}, but I wanted to reply
to your comment that yes, I do see an {{ERROR}} line but it isn't helpful to
me, so I hope it's meaningful to others.
{noformat}
14/11/13 02:58:23 INFO cluster.YarnClientSchedulerBackend: Application report
from ASM:
appMasterRpcPort: -1
appStartTime: 1415847498993
yarnAppState: ACCEPTED
14/11/13 02:58:23 INFO cluster.YarnClientSchedulerBackend: Add WebUI Filter.
org.apache.hadoop.yarn.server.webproxy.amfilter.AmIpFilter,
PROXY_HOST=10.166.39.198,PROXY_URI_BASE=http://10.166.39.198:9046/proxy/application_1415840940647_0001,
/proxy/application_1415840940647_0001
14/11/13 02:58:23 INFO ui.JettyUtils: Adding filter:
org.apache.hadoop.yarn.server.webproxy.amfilter.AmIpFilter
14/11/13 02:58:24 INFO cluster.YarnClientSchedulerBackend: Application report
from ASM:
appMasterRpcPort: 0
appStartTime: 1415847498993
yarnAppState: RUNNING
14/11/13 02:58:29 ERROR cluster.YarnClientSchedulerBackend: Yarn application
already ended: FINISHED
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/metrics/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/stage/kill,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/static,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/executors/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/executors,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/environment/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/environment,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage/rdd/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage/rdd,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/pool/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/pool,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/stage/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/stage,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/json,null}
14/11/13 02:58:29 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages,null}
14/11/13 02:58:29 INFO ui.SparkUI: Stopped Spark web UI at
http://ip-10-166-39-198.ec2.internal:4040
14/11/13 02:58:29 INFO scheduler.DAGScheduler: Stopping DAGScheduler
14/11/13 02:58:29 INFO cluster.YarnClientSchedulerBackend: Shutting down all
executors
14/11/13 02:58:29 INFO cluster.YarnClientSchedulerBackend: Asking each executor
to shut down
14/11/13 02:58:29 INFO cluster.YarnClientSchedulerBackend: Stopped
14/11/13 02:58:30 INFO spark.MapOutputTrackerMasterActor: MapOutputTrackerActor
stopped!
14/11/13 02:58:30 INFO network.ConnectionManager: Selector thread was
interrupted!
14/11/13 02:58:30 INFO network.ConnectionManager: ConnectionManager stopped
14/11/13 02:58:30 INFO storage.MemoryStore: MemoryStore cleared
14/11/13 02:58:30 INFO storage.BlockManager: BlockManager stopped
14/11/13 02:58:30 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
14/11/13 02:58:30 INFO spark.SparkContext: Successfully stopped SparkContext
14/11/13 02:58:30 INFO remote.RemoteActorRefProvider$RemotingTerminator:
Shutting down remote daemon.
14/11/13 02:58:30 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote
daemon shut down; proceeding with flushing remote transports.
14/11/13 02:58:30 INFO Remoting: Remoting shut down
14/11/13 02:58:30 INFO remote.RemoteActorRefProvider$RemotingTerminator:
Remoting shut down.
14/11/13 02:58:47 INFO cluster.YarnClientSchedulerBackend: SchedulerBackend is
ready for scheduling beginning after waiting maxRegisteredResourcesWaitingTime:
30000(ms)
{noformat}
> Failing to launch jobs on Spark on YARN with Hadoop 2.5.0 or later
> ------------------------------------------------------------------
>
> Key: SPARK-4267
> URL: https://issues.apache.org/jira/browse/SPARK-4267
> Project: Spark
> Issue Type: Bug
> Reporter: Tsuyoshi OZAWA
>
> Currently we're trying Spark on YARN included in Hadoop 2.5.1. Hadoop 2.5
> uses protobuf 2.5.0 so I compiled with protobuf 2.5.1 like this:
> {code}
> ./make-distribution.sh --name spark-1.1.1 --tgz -Pyarn
> -Dhadoop.version=2.5.1 -Dprotobuf.version=2.5.0
> {code}
> Then Spark on YARN fails to launch jobs with NPE.
> {code}
> $ bin/spark-shell --master yarn-client
> scala> sc.textFile("hdfs:///user/ozawa/wordcountInput20G").flatMap(line
> => line.split(" ")).map(word => (word, 1)).persist().reduceByKey((a, b) => a
> + b, 16).saveAsTextFile("hdfs:///user/ozawa/sparkWordcountOutNew2");
> java.lang.NullPointerException
>
>
>
> at
> org.apache.spark.SparkContext.defaultParallelism(SparkContext.scala:1284)
> at
> org.apache.spark.SparkContext.defaultMinPartitions(SparkContext.scala:1291)
>
>
>
> at
> org.apache.spark.SparkContext.textFile$default$2(SparkContext.scala:480)
> at $iwC$$iwC$$iwC$$iwC.<init>(<console>:13)
>
>
>
> at $iwC$$iwC$$iwC.<init>(<console>:18)
> at $iwC$$iwC.<init>(<console>:20)
>
>
>
> at $iwC.<init>(<console>:22)
> at <init>(<console>:24)
>
>
>
> at .<init>(<console>:28)
> at .<clinit>(<console>)
>
>
>
> at .<init>(<console>:7)
> at .<clinit>(<console>)
>
>
>
> at $print(<console>)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>
>
>
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>
>
>
> at java.lang.reflect.Method.invoke(Method.java:606)
> at
> org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:789)
>
>
>
> at
> org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1062)
> at
> org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:615)
>
>
>
> at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:646)
> at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:610)
>
>
>
> at
> org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:823)
> at
> org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:868)
>
>
>
> at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:780)
> at
> org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:625)
>
>
>
> at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:633)
> at org.apache.spark.repl.SparkILoop.loop(SparkILoop.scala:638)
>
>
>
> at
> org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:963)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply(SparkILoop.scala:911)
>
>
>
> at
> org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply(SparkILoop.scala:911)
> at
> scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
>
>
>
> at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:911)
> at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1006)
>
>
>
> at org.apache.spark.repl.Main$.main(Main.scala:31)
> at org.apache.spark.repl.Main.main(Main.scala)
>
>
>
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>
>
>
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:606)
>
>
>
> at org.apache.spark.deploy.SparkSubmit$.launch(SparkSubmit.scala:329)
> at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:75)
>
>
>
> at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
> {code}
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