[
https://issues.apache.org/jira/browse/SPARK-4267?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14209231#comment-14209231
]
Matthew Daniel commented on SPARK-4267:
---------------------------------------
I rebuilt the assembly using {{./sbt/sbt -Dhadoop.version=2.4.0 -Pyarn
assembly}} and moved the old jars out of the {{lib}} in the unpacked
distribution directory and moved the new
{{assembly/target/scala-2.10/spark-assembly-1.1.0-hadoop2.4.0.jar}} into their
place. Running {{bin/spark-shell}} yields the same output, and (as one might
expect) the same NPE.
I've tried to trim the log output to be contextual without being verbose, so
please let me know if there are more details that would help with the diagnosis.
{noformat}
14/11/13 03:57:13 INFO cluster.YarnClientSchedulerBackend: Add WebUI Filter.
org.apache.hadoop.yarn.server.webproxy.amfilter.AmIpFilter,
PROXY_HOST=10.166.39.198,PROXY_URI_BASE=http://10.166.39.198:9046/proxy/application_1415840940647_0002,
/proxy/application_1415840940647_0002
14/11/13 03:57:13 INFO ui.JettyUtils: Adding filter:
org.apache.hadoop.yarn.server.webproxy.amfilter.AmIpFilter
14/11/13 03:57:13 INFO cluster.YarnClientSchedulerBackend: Application report
from ASM:
appMasterRpcPort: 0
appStartTime: 1415851029508
yarnAppState: RUNNING
14/11/13 03:57:18 ERROR cluster.YarnClientSchedulerBackend: Yarn application
already ended: FINISHED
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/metrics/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/stage/kill,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/static,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/executors/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/executors,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/environment/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/environment,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage/rdd/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage/rdd,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/storage,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/pool/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/pool,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/stage/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/stage,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages/json,null}
14/11/13 03:57:18 INFO handler.ContextHandler: stopped
o.e.j.s.ServletContextHandler{/stages,null}
14/11/13 03:57:18 INFO ui.SparkUI: Stopped Spark web UI at
http://ip-10-166-39-198.ec2.internal:4040
14/11/13 03:57:18 INFO scheduler.DAGScheduler: Stopping DAGScheduler
14/11/13 03:57:18 INFO cluster.YarnClientSchedulerBackend: Shutting down all
executors
14/11/13 03:57:18 INFO cluster.YarnClientSchedulerBackend: Asking each executor
to shut down
14/11/13 03:57:18 INFO cluster.YarnClientSchedulerBackend: Stopped
14/11/13 03:57:19 INFO spark.MapOutputTrackerMasterActor: MapOutputTrackerActor
stopped!
14/11/13 03:57:19 INFO network.ConnectionManager: Selector thread was
interrupted!
14/11/13 03:57:19 INFO network.ConnectionManager: ConnectionManager stopped
14/11/13 03:57:19 INFO storage.MemoryStore: MemoryStore cleared
14/11/13 03:57:19 INFO storage.BlockManager: BlockManager stopped
14/11/13 03:57:19 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
14/11/13 03:57:19 INFO spark.SparkContext: Successfully stopped SparkContext
14/11/13 03:57:19 INFO remote.RemoteActorRefProvider$RemotingTerminator:
Shutting down remote daemon.
14/11/13 03:57:19 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote
daemon shut down; proceeding with flushing remote transports.
14/11/13 03:57:19 INFO Remoting: Remoting shut down
14/11/13 03:57:19 INFO remote.RemoteActorRefProvider$RemotingTerminator:
Remoting shut down.
14/11/13 03:57:37 INFO cluster.YarnClientSchedulerBackend: SchedulerBackend is
ready for scheduling beginning after waiting maxRegisteredResourcesWaitingTime:
30000(ms)
14/11/13 03:57:37 INFO repl.SparkILoop: Created spark context..
Spark context available as sc.
{noformat}
> Failing to launch jobs on Spark on YARN with Hadoop 2.5.0 or later
> ------------------------------------------------------------------
>
> Key: SPARK-4267
> URL: https://issues.apache.org/jira/browse/SPARK-4267
> Project: Spark
> Issue Type: Bug
> Reporter: Tsuyoshi OZAWA
>
> Currently we're trying Spark on YARN included in Hadoop 2.5.1. Hadoop 2.5
> uses protobuf 2.5.0 so I compiled with protobuf 2.5.1 like this:
> {code}
> ./make-distribution.sh --name spark-1.1.1 --tgz -Pyarn
> -Dhadoop.version=2.5.1 -Dprotobuf.version=2.5.0
> {code}
> Then Spark on YARN fails to launch jobs with NPE.
> {code}
> $ bin/spark-shell --master yarn-client
> scala> sc.textFile("hdfs:///user/ozawa/wordcountInput20G").flatMap(line
> => line.split(" ")).map(word => (word, 1)).persist().reduceByKey((a, b) => a
> + b, 16).saveAsTextFile("hdfs:///user/ozawa/sparkWordcountOutNew2");
> java.lang.NullPointerException
>
>
>
> at
> org.apache.spark.SparkContext.defaultParallelism(SparkContext.scala:1284)
> at
> org.apache.spark.SparkContext.defaultMinPartitions(SparkContext.scala:1291)
>
>
>
> at
> org.apache.spark.SparkContext.textFile$default$2(SparkContext.scala:480)
> at $iwC$$iwC$$iwC$$iwC.<init>(<console>:13)
>
>
>
> at $iwC$$iwC$$iwC.<init>(<console>:18)
> at $iwC$$iwC.<init>(<console>:20)
>
>
>
> at $iwC.<init>(<console>:22)
> at <init>(<console>:24)
>
>
>
> at .<init>(<console>:28)
> at .<clinit>(<console>)
>
>
>
> at .<init>(<console>:7)
> at .<clinit>(<console>)
>
>
>
> at $print(<console>)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>
>
>
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
>
>
>
> at java.lang.reflect.Method.invoke(Method.java:606)
> at
> org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:789)
>
>
>
> at
> org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1062)
> at
> org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:615)
>
>
>
> at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:646)
> at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:610)
>
>
>
> at
> org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:823)
> at
> org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:868)
>
>
>
> at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:780)
> at
> org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:625)
>
>
>
> at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:633)
> at org.apache.spark.repl.SparkILoop.loop(SparkILoop.scala:638)
>
>
>
> at
> org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:963)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply(SparkILoop.scala:911)
>
>
>
> at
> org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply(SparkILoop.scala:911)
> at
> scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
>
>
>
> at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:911)
> at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1006)
>
>
>
> at org.apache.spark.repl.Main$.main(Main.scala:31)
> at org.apache.spark.repl.Main.main(Main.scala)
>
>
>
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
>
>
>
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:606)
>
>
>
> at org.apache.spark.deploy.SparkSubmit$.launch(SparkSubmit.scala:329)
> at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:75)
>
>
>
> at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
> {code}
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