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https://issues.apache.org/jira/browse/SPARK-4816?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15056168#comment-15056168
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RJ Nowling edited comment on SPARK-4816 at 12/14/15 3:58 PM:
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I think [SPARK-9507] fixed the issue. I checked out git commit
{{5ad9f950c4bd0042d79cdccb5277c10f8412be85}} (the commit before
[https://github.com/apache/spark/commit/b53ca247d4a965002a9f31758ea2b28fe117d45f])
and found that the {{netlib-native}} libraries were missing:
{code}
$ git checkout 5ad9f950c4bd0042d79cdccb5277c10f8412be85
$ mvn -Pnetlib-lgpl -Phadoop-2.4 -Dhadoop.version=2.4.0 -DskipTests clean
package
$ zipinfo -1
assembly/target/scala-2.10/spark-assembly-1.4.2-SNAPSHOT-hadoop2.4.0.jar | grep
netlib-native
(No output)
{code}
As such, the changes in [SPARK-8819] might have been the original cause.
was (Author: rnowling):
I think issue [SPARK-9507] fixed the issue. I checked out git commit
5ad9f950c4bd0042d79cdccb5277c10f8412be85 (the commit before
[https://github.com/apache/spark/commit/b53ca247d4a965002a9f31758ea2b28fe117d45f])
and found that the {{netlib-native}} libraries were missing:
{code}
$ git checkout 5ad9f950c4bd0042d79cdccb5277c10f8412be85
$ mvn -Pnetlib-lgpl -Phadoop-2.4 -Dhadoop.version=2.4.0 -DskipTests clean
package
$ zipinfo -1
assembly/target/scala-2.10/spark-assembly-1.4.2-SNAPSHOT-hadoop2.4.0.jar | grep
netlib-native
(No output)
{code}
As such, the changes in [SPARK-8819] might have been the original cause.
> Maven profile netlib-lgpl does not work
> ---------------------------------------
>
> Key: SPARK-4816
> URL: https://issues.apache.org/jira/browse/SPARK-4816
> Project: Spark
> Issue Type: Bug
> Components: Build
> Affects Versions: 1.1.0
> Environment: maven 3.0.5 / Ubuntu
> Reporter: Guillaume Pitel
> Priority: Minor
> Fix For: 1.1.1
>
>
> When doing what the documentation recommends to recompile Spark with Netlib
> Native system binding (i.e. to bind with openblas or, in my case, MKL),
> mvn -Pnetlib-lgpl -Pyarn -Phadoop-2.3 -Dhadoop.version=2.3.0 -DskipTests
> clean package
> The resulting assembly jar still lacked the netlib-system class. (I checked
> the content of spark-assembly...jar)
> When forcing the netlib-lgpl profile in MLLib package to be active, the jar
> is correctly built.
> So I guess it's a problem with the way maven passes profiles activitations to
> children modules.
> Also, despite the documentation claiming that if the job's jar contains
> netlib with necessary bindings, it should works, it does not. The classloader
> must be unhappy with two occurrences of netlib ?
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