It is genuinely amazing.  At the poster session, once I was standing up in 
front of a static poster telling people about it, it occurred to me that anyone 
that knew what it meant would probably think (/prefer to believe) the JalviewJS 
screenshot was a mockup.  I felt I had to keep stressing it actually existed! :)
Alas not enough room for the laptop to be visible, but it definitely needs to 
be seen in real life!
Ben



On 18 Mar 2019, at 10:51, Mungo Carstairs (Staff) 
<[email protected]<mailto:[email protected]>> wrote:

I am pleased, no thrilled, to report that the Java and JS branches of Jalview, 
after some time apart, have been reunited on the Jalview-JS/develop branch. 
This now incorporates most changes for 2.11, as well as all adaptations for 
JalviewJS, and is therefore The Future. The Future can be found at

https://builds.jalview.org/artifact/JB-JB1/shared/build-10/jalviewjs/jalview_bin_Jalview.html?open
 examples/unire50.fa features 
examples/exampleFeatures.txt<https://builds.jalview.org/artifact/JB-JB1/shared/build-10/jalviewjs/jalview_bin_Jalview.html?open%20examples/unire50.fa%20features%20examples/exampleFeatures.txt>

JalviewJS does pretty much everything that Jalview Java does, except:

  *   run web services (alignment etc)
  *   talk to Chimera
  *   load VCF data
  *   make the coffee - no wait, Jalview doesn't do that either

It can read and write Jalview project files - but loading large projects (e.g. 
gene+features) is for now still prohibitively slow (minutes).

The remaining changes for 2.11 will be merged to develop and JalviewJS as they 
are signed off.
After 2.11 release we should then have a single unified codebase.
Meanwhile, please let me know if you spot any strange behaviour!

thanks,

Mungo



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Mungo Carstairs
Jalview Computational Scientist
The Barton Group
Division of Computational Biology
School of Life Sciences
University of Dundee, Dundee, Scotland, UK
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[email protected]<mailto:[email protected]>


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