Yes, great achievement getting it merged Mungo! Lets hope there aren't too many surprises lurking in the merged codebase!
Ben, you had the laptop open in this picture at the poster... https://twitter.com/Jalview/status/1106877999054503936 Geoff. On 18/03/2019 11:10, Benedict Soares (Staff) wrote: It is genuinely amazing. At the poster session, once I was standing up in front of a static poster telling people about it, it occurred to me that anyone that knew what it meant would probably think (/prefer to believe) the JalviewJS screenshot was a mockup. I felt I had to keep stressing it actually existed! :) Alas not enough room for the laptop to be visible, but it definitely needs to be seen in real life! Ben On 18 Mar 2019, at 10:51, Mungo Carstairs (Staff) <[email protected]<mailto:[email protected]>> wrote: I am pleased, no thrilled, to report that the Java and JS branches of Jalview, after some time apart, have been reunited on the Jalview-JS/develop branch. This now incorporates most changes for 2.11, as well as all adaptations for JalviewJS, and is therefore The Future. The Future can be found at https://builds.jalview.org/artifact/JB-JB1/shared/build-10/jalviewjs/jalview_bin_Jalview.html?open examples/unire50.fa features examples/exampleFeatures.txt<https://builds.jalview.org/artifact/JB-JB1/shared/build-10/jalviewjs/jalview_bin_Jalview.html?open%20examples/unire50.fa%20features%20examples/exampleFeatures.txt> JalviewJS does pretty much everything that Jalview Java does, except: * run web services (alignment etc) * talk to Chimera * load VCF data * make the coffee - no wait, Jalview doesn't do that either It can read and write Jalview project files - but loading large projects (e.g. gene+features) is for now still prohibitively slow (minutes). The remaining changes for 2.11 will be merged to develop and JalviewJS as they are signed off. After 2.11 release we should then have a single unified codebase. Meanwhile, please let me know if you spot any strange behaviour! thanks, Mungo [University of Dundee shield logo]<http://uod.ac.uk/sig-home> Mungo Carstairs Jalview Computational Scientist The Barton Group Division of Computational Biology School of Life Sciences University of Dundee, Dundee, Scotland, UK www.jalview.org<http://www.jalview.org/> www.compbio.dundee.ac.uk<http://www.compbio.dundee.ac.uk/> [email protected]<mailto:[email protected]> [University of Dundee Facebook]<http://uod.ac.uk/sig-fb> [University of Dundee Twitter] <http://uod.ac.uk/sig-tw> [University of Dundee LinkedIn] <http://uod.ac.uk/sig-li> [University of Dundee YouTube] <http://uod.ac.uk/sig-yt> [University of Dundee Instagram] <http://uod.ac.uk/sig-ig> [University of Dundee Snapchat] <http://uod.ac.uk/sig-sc> We're Scottish University of the Year again!<http://uod.ac.uk/sig-strapline> The Times / Sunday Times Good University Guide 2016 and 2017 The University of Dundee is a registered Scottish Charity, No: SC015096 _______________________________________________ Jalview-dev mailing list [email protected]<mailto:[email protected]> http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-dev The University of Dundee is a registered Scottish Charity, No: SC015096 _______________________________________________ Jalview-dev mailing list [email protected]<mailto:[email protected]> http://www.compbio.dundee.ac.uk/mailman/listinfo/jalview-dev -- Geoff Barton, FRSE FRSB | Professor of Bioinformatics | Head of Division of Computational Biology School of Life Sciences | University of Dundee, Scotland, UK | [email protected]<mailto:[email protected]> Tel: +44 1382 385860 | www.compbio.dundee.ac.uk<http://www.compbio.dundee.ac.uk> | twitter: @gjbarton The University of Dundee is registered Scottish charity: No.SC015096 The University of Dundee is a registered Scottish Charity, No: SC015096
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