Hi Nebosja - it looks like you might not have seen my reply to your earlier 
posting about this... maybe it went to spam ?  Trying you direct just to make 
sure!

You can see my (rather lengthy) reply in the archives here:

http://www.jalview.org/pipermail/jalview-discuss/2018-October/001502.html

Hope it helps !
Jim.

On 18/10/2018 16:48, #BOGDANOVIC NEBOJSA# wrote:

Greetings everyone!


I am relatively new to Jalview so maybe this will seem like a noob question. I 
am trying to perform a phosphorylation site prediction of the bacterial 
proteins that I aligned in Jalview. In the demo project, I saw it was possible 
to do that but I haven't been able to backtrack and do this for my alignment.


Can anyone provide some insight on this matter?


Thank you all in advance.


Regards,

Nebojsa Bogdanovic



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