[
https://issues.apache.org/jira/browse/ARROW-14839?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17451168#comment-17451168
]
Jonathan Keane commented on ARROW-14839:
----------------------------------------
Odd, when I ran this locally I definitely had a complain about the hash not
matching (when I hadn't yet updated it to the hash for the @HEAD tar.gz),
anyway I've submitted it again removing all of the extra URLs that could be
being accessed to get 1.1.9 (or 1.1.8 for that matter!), let's see if that
fails.
> [R] test-fedora-r-clang-sanitizer job failing due to snappy causing a
> sanitizer error
> -------------------------------------------------------------------------------------
>
> Key: ARROW-14839
> URL: https://issues.apache.org/jira/browse/ARROW-14839
> Project: Apache Arrow
> Issue Type: Bug
> Components: R
> Reporter: Nicola Crane
> Priority: Major
> Labels: pull-request-available
> Time Spent: 50m
> Remaining Estimate: 0h
>
> [A recent build
> failure|https://dev.azure.com/ursacomputing/crossbow/_build/results?buildId=16168&view=logs&j=0da5d1d9-276d-5173-c4c4-9d4d4ed14fdb&t=d9b15392-e4ce-5e4c-0c8c-b69645229181&l=12205]
> We could consider mentioning this upstream to the snappy project. They
> [explicitly support
> clang|https://github.com/google/snappy/blob/master/CONTRIBUTING.md] clang. I
> have confirmed (locally, by setting {{ARROW_VERBOSE_THIRDPARTY_BUILD=ON}}
> that snapy 1.1.9 definitely is being installed (which we bumped in
> ARROW-14594).
> We might also try building with the master branch of snappy (which can be
> accomplished by changing
> https://github.com/apache/arrow/blob/master/cpp/thirdparty/versions.txt#L80-L81
> to point to the master branch tar.gz.
> {code}
> #7 0x7f39908049c0 in arrow::util::internal::(anonymous
> namespace)::SnappyCodec::Decompress(long, unsigned char const*, long,
> unsigned char*) /arrow/cpp/src/arrow/util/compression_snappy.cc:56:10
> #8 0x7f398f1489d7 in parquet::(anonymous
> namespace)::SerializedPageReader::DecompressIfNeeded(std::__1::shared_ptr<arrow::Buffer>,
> int, int, int) /arrow/cpp/src/parquet/column_reader.cc:492:3
> #9 0x7f398f144897 in parquet::(anonymous
> namespace)::SerializedPageReader::NextPage()
> /arrow/cpp/src/parquet/column_reader.cc:404:11
> #10 0x7f398f1ab37f in parquet::(anonymous
> namespace)::ColumnReaderImplBase<parquet::PhysicalType<(parquet::Type::type)5>
> >::ReadNewPage() /arrow/cpp/src/parquet/column_reader.cc:595:31
> #11 0x7f398f1aaf04 in parquet::(anonymous
> namespace)::ColumnReaderImplBase<parquet::PhysicalType<(parquet::Type::type)5>
> >::HasNextInternal() /arrow/cpp/src/parquet/column_reader.cc:575:12
> #12 0x7f398f2130ef in parquet::internal::(anonymous
> namespace)::TypedRecordReader<parquet::PhysicalType<(parquet::Type::type)5>
> >::ReadRecords(long) /arrow/cpp/src/parquet/column_reader.cc:1227:18
> #13 0x7f398efbe8d8 in parquet::arrow::(anonymous
> namespace)::LeafReader::LoadBatch(long)
> /arrow/cpp/src/parquet/arrow/reader.cc:467:46
> #14 0x7f398efe86db in parquet::arrow::ColumnReaderImpl::NextBatch(long,
> std::__1::shared_ptr<arrow::ChunkedArray>*)
> /arrow/cpp/src/parquet/arrow/reader.cc:108:5
> #15 0x7f398efce3a2 in parquet::arrow::(anonymous
> namespace)::FileReaderImpl::ReadColumn(int, std::__1::vector<int,
> std::__1::allocator<int> > const&, parquet::arrow::ColumnReader*,
> std::__1::shared_ptr<arrow::ChunkedArray>*)
> /arrow/cpp/src/parquet/arrow/reader.cc:273:20
> #16 0x7f398efda5bc in parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4::operator()(unsigned long,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl>) const
> /arrow/cpp/src/parquet/arrow/reader.cc:1180:5
> #17 0x7f398efdb2e7 in
> std::__1::enable_if<((!(std::is_void<arrow::Result<std::__1::shared_ptr<arrow::ChunkedArray>
> > >::value)) &&
> (!(is_future<arrow::Result<std::__1::shared_ptr<arrow::ChunkedArray> >
> >::value))) && ((!(arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray>
> >::is_empty)) ||
> (std::is_same<arrow::Result<std::__1::shared_ptr<arrow::ChunkedArray> >,
> arrow::Status>::value)), void>::type
> arrow::detail::ContinueFuture::operator()<parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&, unsigned long&,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl>&,
> arrow::Result<std::__1::shared_ptr<arrow::ChunkedArray> >,
> arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >
> >(arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&, unsigned long&,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl>&) const
> /arrow/cpp/src/arrow/util/future.h:148:23
> #18 0x7f398efdb2e7 in
> decltype(std::__1::forward<arrow::detail::ContinueFuture&>(fp)(std::__1::forward<arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray>
> >&>(fp0), std::__1::forward<parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&>(fp0), std::__1::forward<unsigned
> long&>(fp0),
> std::__1::forward<std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl>&>(fp0)))
> std::__1::__invoke<arrow::detail::ContinueFuture&,
> arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >&,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&, unsigned long&,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl>&>(arrow::detail::ContinueFuture&,
> arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >&,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&, unsigned long&,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl>&)
> /usr/bin/../include/c++/v1/type_traits:3899:1
> #19 0x7f398efdb0a5 in
> std::__1::__bind_return<arrow::detail::ContinueFuture,
> std::__1::tuple<arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4, unsigned long,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl> >, std::__1::tuple<>,
> __is_valid_bind_return<arrow::detail::ContinueFuture,
> std::__1::tuple<arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4, unsigned long,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl> >, std::__1::tuple<>
> >::value>::type std::__1::__bind<arrow::detail::ContinueFuture,
> arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >&,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&, unsigned long&,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl> >::operator()<>()
> /usr/bin/../include/c++/v1/functional:2886:20
> #20 0x7f398efdb0a5 in arrow::internal::FnOnce<void
> ()>::FnImpl<std::__1::__bind<arrow::detail::ContinueFuture,
> arrow::Future<std::__1::shared_ptr<arrow::ChunkedArray> >&,
> parquet::arrow::(anonymous
> namespace)::FileReaderImpl::DecodeRowGroups(std::__1::shared_ptr<parquet::arrow::(anonymous
> namespace)::FileReaderImpl>, std::__1::vector<int, std::__1::allocator<int>
> > const&, std::__1::vector<int, std::__1::allocator<int> > const&,
> arrow::internal::Executor*)::$_4&, unsigned long&,
> std::__1::shared_ptr<parquet::arrow::ColumnReaderImpl> > >::invoke()
> /arrow/cpp/src/arrow/util/functional.h:152:42
> #21 0x7f39907017d7 in arrow::internal::FnOnce<void ()>::operator()() &&
> /arrow/cpp/src/arrow/util/functional.h:140:17
> #22 0x7f39907002f5 in
> arrow::internal::WorkerLoop(std::__1::shared_ptr<arrow::internal::ThreadPool::State>,
> std::__1::__list_iterator<std::__1::thread, void*>)
> /arrow/cpp/src/arrow/util/thread_pool.cc:177:11
> #23 0x7f39906ffd0b in
> arrow::internal::ThreadPool::LaunchWorkersUnlocked(int)::$_3::operator()()
> const /arrow/cpp/src/arrow/util/thread_pool.cc:344:7
> #24 0x7f39906ffd0b in
> decltype(std::__1::forward<arrow::internal::ThreadPool::LaunchWorkersUnlocked(int)::$_3>(fp)())
>
> std::__1::__invoke<arrow::internal::ThreadPool::LaunchWorkersUnlocked(int)::$_3>(arrow::internal::ThreadPool::LaunchWorkersUnlocked(int)::$_3&&)
> /usr/bin/../include/c++/v1/type_traits:3899:1
> #25 0x7f39906ff62c in void*
> std::__1::__thread_proxy<std::__1::tuple<std::__1::unique_ptr<std::__1::__thread_struct,
> std::__1::default_delete<std::__1::__thread_struct> >,
> arrow::internal::ThreadPool::LaunchWorkersUnlocked(int)::$_3> >(void*)
> /usr/bin/../include/c++/v1/thread:291:5
> #26 0x7f39a0e0c3f8 in start_thread (/lib64/libpthread.so.0+0x93f8)
> #27 0x7f39a0c4f4c2 in clone (/lib64/libc.so.6+0x1014c2)
> SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior
> /tmp/RtmpZTvzHP/file587026c727/snappy_ep-prefix/src/snappy_ep/snappy.cc:351:43
> in
> > head(df)
> {code}
--
This message was sent by Atlassian Jira
(v8.20.1#820001)
