Is this the proper way to retreive this data?
arghh ... NO!


oops ;-)

> Anything that you want *must* go through the JmolViewer.


O.k. So all I need to know about is JmolViewer.java. Makes live easier.


> I prefer to have them in a separate subdirectory because it is easier to
> manager. But since people think that they are public then it looks like I
> need to move them all into the viewer directory and remove the 'public'
> designations.

hm. What about providing an Interface for JmolViewer? I guess if there would have been one in place, it would have stopped me from getting the idea to try accessing data from lower levels...


> > How can the insertion code be retreived?
>
> If the JmolViewer does not provide the information that you need then we
> will add it.


just did a test with e.g. 1h4w.  it seems that getAtomSequenceCode
returns "221", but not "221A".
Is there a separate method to get the insertion code for a residue?


> I have just added
> String JmolViewer.getAtomChain(int atomIndex)
> String JmolViewer.getAtomSequenceCode(int atomIndex)


Thank you! :-)


Andreas


-- --------------------------------------------------

Andreas Prlic Wellcome Trust Sanger Institute
Hinxton, Cambridge CB10 1SA, UK






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