Hi all,
some time ago there was a discussion on how to download chemical entities from
the internet. I then explained a system which I've been using for years now
which allows for things like
load dadml://any/pdbid?1CRN
This has now been added to Jmol, but it is not fully working yet... but that's
ok in a developers release.
Try in HEAD:
load dadml://any/CAS-NUMBER?50-00-0
This can be resolved into a URL and is then tried to be loaded, but this
fails... Miguel, I get a FileNotFound, and am not sure what I do wrong.
This is how the URI gets converted into a URL:
URI uri = new URI(name);
URL resolvedURL = resolveLink(uri);
if (resolvedURL != null) {
fullPathName = resolvedURL.toString();
fileName =
fullPathName.substring(fullPathName.lastIndexOf('/') + 1,
fullPathName.length());
}
where name = "dadml://any/CAS-NUMBER?50-00-0"
The resulting URL is:
http://www.woc.sci.kun.nl/data/dadml/2d/cml/50-00-0.cml
Which can be resolved...
If I do:
load http://www.woc.sci.kun.nl/data/dadml/2d/cml/50-00-0.cml
I get a CML not supported error :( Can this be the reason of the
FileNotFound exception?
Egon
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