>> sorry for perpetuating confusion :-) when I visualize hbonds with >> 'hbonds 0.1' they are white. if I color hbonds by type, the 'default' >> color is yellow. I am advocating consistency between these two defaults >> - and I suggest white since it is the cpk color for hydrogen. > > Is that using Chime with a PDB file? My experience is different. With > Chime I get half-colored CPK color of donor, half acceptor (blue/red for > NH/O) as default. (Aside--I don't know which is properly called the > donor--the one with the H or the one with the pair of electrons.) > > This is also true with my version of Raswin (2.6).
Also true on RasMol 2.6b2. > So from what I can see, the default is a H-bond that has the colors of > the two end atoms. Correct. This is consistent with the other bond types in RasMol. (I suspect that Tim may be having a *bad hair day* :-) Miguel ------------------------------------------------------- This SF.Net email is sponsored by: SourceForge.net Broadband Sign-up now for SourceForge Broadband and get the fastest 6.0/768 connection for only $19.95/mo for the first 3 months! http://ads.osdn.com/?ad_id=2562&alloc_id=6184&op=click _______________________________________________ Jmol-developers mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-developers
