Feature Requests item #1017642, was opened at 2004-08-27 16:46 Message generated for change (Comment added) made by egonw You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379136&aid=1017642&group_id=23629
Category: None Group: None Status: Open Priority: 5 Submitted By: Miguel (migueljmol) Assigned to: Nobody/Anonymous (nobody) Summary: large memory requirements Initial Comment: Jan says that Jmol requires a lot of memory: ---------------------------- Original Message ---------------------------- Subject: Re: [Jmol-developers] memory requirements From: "Jan Reichert" <[EMAIL PROTECTED]> Date: Fri, August 27, 2004 8:29 To: [EMAIL PROTECTED] -------------------------------------------------------------------------- [snip] >>and while RasMol need 90 MB for a very big biological unit (40 MB PDB >> >> >file) I need >java -Xmx512m -jar Jmol.jar 1f8v.pdb1 >Jan, 1F8V from the PDB is less than 800K uncompressed. > > yes, but the biological relevant unit ftp://ndbserver.rutgers.edu/NDB/coordinates/na-biol/1f8v.pdb1 contains 60 models of this asymmetric unit PDB file. On Linux (other performance is good:-) it uses 348 MB RSS (on IRIX, if I remember right, about 480, and on XP the overall performance is unusable) >And the file from scop cannot require 512Mb or it would not work in the Java Plug-in applet environment. ---------------------------------------------------------------------- >Comment By: Egon Willighagen (egonw) Date: 2004-08-29 18:10 Message: Logged In: YES user_id=25678 Miguel, I think you posted something about don't having a tool to see memory usage... Please check out JMP... I've used the program some time ago, and it looked usefull... the amount of information you get can be overwhelming, so you can do selections on certain java packages...: http://www.khelekore.org/jmp/ ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379136&aid=1017642&group_id=23629 ------------------------------------------------------- This SF.Net email is sponsored by BEA Weblogic Workshop FREE Java Enterprise J2EE developer tools! Get your free copy of BEA WebLogic Workshop 8.1 today. http://ads.osdn.com/?ad_id=5047&alloc_id=10808&op=click _______________________________________________ Jmol-developers mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-developers
