Thanks, Nic, I get it now. What I was missing was

stereo redcyan

It was right there, of course, I just missed it.

I get it now. It will be fun to set up a little example for this.
Anyone want to do it? Maybe with some animation?

I suggest doing it based on 1crn.pdb:

http://www.stolaf.edu/people/hansonr/jmol/docs/?example=.slab~stereo%20redcyan

Bob

--------

stereo on|off|{degrees}
stereo {degrees} redcyan|redblue

The stereo command supports two forms of stereo rendering for molecules.
The {degrees} value defines the angle of rotation about the y axis for the
right image. The default value is 5 degrees of rotation for cross-eyed
viewing. Negative values can be supplied for wall-eyed viewing.

Jmol also supports analglyphic rendering of molecules ... for viewing with
red+cyan or red+blue glasses. In this case, the default rotation is 3
degrees. One should also experiment with different background colors when
using redcyan or redblue stereo rendering. Many think that 'background
grey' looks better than 'background white' or 'background black'.




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Robert M. Hanson, [EMAIL PROTECTED], 507-646-3107
Professor of Chemistry, St. Olaf College 1520 St. Olaf Ave., Northfield, MN 
55057
mailto:[EMAIL PROTECTED] http://www.stolaf.edu/people/hansonr



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