Bob Hanson wrote:
> Jmol Developers,
>
> I made some changes to the JavaScript/Java interface and may be onto
> something. I am no longer seeing any wild fluctuation in memory
> whatsoever at the URL below. Loading reasonably large files seems to
> result in only minimal memory increases. Please take a look and answer
> a few questions for me:

Test  environment:
  SuSE Linux 9.3
  Firefox 1.0.7
  Java 1.4.2_11
>
> a) does http://fusion.stolaf.edu/chemistry/jmol/xtalx load OK for you?
It looks ok.
>
> b) does the "waiting for applet" title message disappear within a few
> seconds? (You may not even see it.)
It takes about 2 minutes to disappear. (although the applet  is loaded
much earlier)
>
> c) do the radio buttons work?
At least most of them do result in a visible change in the applet and
the changes  seem to correspond to the button descriptions.
>
> d) press LOAD. Everything seem to be OK?
Yes.
>
> e) load the "maleic.cif (18 models)" file. Still working?
Sometimes working, sometimes the browser freezes.
>
> f) at this point, if you know how, can you report how much memory the
> browser is using?
VIRT: 317m  RES: 133m  SHR: 28m  (no change during testing)
>
> g) can you load a CIF file -- perhaps 1crn? [This uses an http://
> server call within the applet.]
1crn is loaded but all three other PDB codes I tried  (1deh, 3cro, 1a2c)
produced an error.
(ERROR MESSAGE: jmolApplet0: script ERROR: ScriptException:Could not
read file:java.lang.NullPointerException
    Script line:load
"http://fusion.stolaf.edu/chemistry/jmol/xtalx/loaddatajs.cfm?app=0&url=http%3A//www.rcsb.org/pdb/displayFile.do%3FfileFormat%3DCIF%26structureId%3D3CRO&pdbid=3CRO&fileformat=CIF";
{1,1,1};;set perspectivedepth off;set defaultLattice 0;color axes
grey;color unitcell white;set unitcell 3;;set unitcell 0;)
>
> h) can you load an "AMS (mineral)" crystal file -- perhaps quartz?
> [This uses a dynamic DOM script node to preload HTML data and then
> pass that on to the applet using applet.loadInline().]
Something is loaded and displayed but the browser always freezes afterwards.
>
> i) can you get your browser to lock up during any of this?
>
Besides the freezes described above the browser sometimes freezes if the
'show orientation' link is used.

Regards,
Rolf


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