Christoph,

So rotateSelected is what you want. (Also just two words: ROTATE SELECTED.)
As Angel mentions, I don't think you will run into any trouble here unless
you want to apply multiple rotation/translations. In that case, you could
save the rotation/translation as a Jmol variable in the form of a quaternion
and just do a reset. But also, we do have

save coordinates xxxx
restore coordinates xxxx

So you COULD do that if you felt you needed to. That does require some
amount of memory, so in certain cases (ribosome, virus capsid) that can be a
problem.

Bob



On Wed, Nov 3, 2010 at 3:21 PM, Dr. Christoph Gille <
christoph.gi...@charite.de> wrote:

>
> rotateSelected 3x3 and translateSelected vector
> may be suitable.
> However, these 3D-operations seem to act on the current coordinates of the
> model.
>
> Butr my matrix/translation vector needs to be applied to the original
> coordinates
> as recorded in the PDB file instead to the
> current coordinates.
>
> I assume that JMol does not keep a record of the original coordinates
> before
> any rotation or translation has been performed.
>
> That means that Strap needs to store a copy?
> Is this the case?
>
> Thanks
> Christoph
>
>
>
>
>
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-- 
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Professor of Chemistry
St. Olaf College
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