at 3.36p EDT on 2003 November 28 Friday Miguel Howard said:

> >> > RasMol 2.7.2.1 handles them according to the molecule parameter. In
> >> the sequence, they are loaded, they were assigned numbers 1 to 5.
> >> You address which molecule is used for transformation or rendering
> >> by
> > [...]
> >>
> >> This looks like a good extension to the scripting language.
> >>
> > I lost the original part of this discussion - does RasMol use molecule
> > to refer to different models in an NMR structure?
> There really wasn't much other discussion.
> 
> > I ask because I am not convinced that 'model' and 'molecule' should
> > be interchangeable.  if this is what RasMol 2.7 does, maybe someone
> > can try and convince me why - in my mind, one can have multiple
> > 'models' of the same molecule.  :-)
> 
> I agree that from reading Jan's script it looks like they are being
> rather loose with the terms model & molecule.
> 
upon further clarification, Jan told me that model and molecule are
different in RasMol, addressed by different commands, so it appears that
the program is handling the two concepts as I understand them.

forgive my ignorance; neither Chime nor RasMol 2.6 use the term molecule.

regards,

:tim

-- 
timothy driscoll
molvisions - molecular graphics & visualization
<http://www.molvisions.com/>
usa:north carolina:wake forest
 


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