Phillip wrote:

> Just to clarify.  It is not the applet loading that I am concerned
> about.   If I load a molecule, the applet loads initially.   If I then
> call for another molecule, the applet is already loaded and should not
> reload via my javascript.   The only thing that should happen is a new
> molecule appears in the applet.   That part is what seems to have
> slowed down.

Then I think that is some evidence for my 'garbage collection' theory ...

However, I am now a little more concerned that there may be something else
going on. The molecules you are working with are rather small ... it
doesn't seem to me that the system would be generating enough garbage for
it to be a noticable delay. (If this isn't clear then don't worry about it
... it isn't that important.)

1. Can you open your Java console and see if there is a bunch of junk
coming out .... maybe I left in some logging someplace.

2. I will email you another applet ... let me know if it is any faster.



Miguel





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