Robert wrote:configure Jmol like RasMol make a script file, starting Jmol with the temporary file from the browser
...
Robert,
OK, now I understand. You want something that is installed on the local machine and does not require a web server.
Specifically, the American Chemical Society now provides MOL files and
other online content in the Web versions of their publications, but it
does not deliver applets to render the content. (Maybe it should, but
it doesn't.)
(Perhaps we should suggest that they consider using Jmol :-)
http://www.imb-jena.de/ImgLibPDB/docs/RasMolInfo.html
(that is an application for
load pdb inline
with RasMol and Chime, I'd like to mention at this point, again)
I have noticed, that the Jmol application has a Open URL (which does not work for me), so you may cut and past the link from a web page.
What about a command line switch -url
or
jmol.sh -e 'load pdb http://www.rcsb.org/pdb/cgi/export.cgi/1PLC.pdb?format=PDB&pdbId=1PLC&compression=None";
jmol.sh -script http://www.imb-jena.de/cgi-bin/rascript.exe?CODE=1plc
this would be nice.
Regards, Jan
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