Jan, Thank you for giving me feedback on the chain colors.
> with some structures the differences with the chain color scheme is > hardly visible, e.g. 1dsf > http://www.imb-jena.de/cgi-bin/SCOPlnk.exe?JMOL=1dsf You are right ... this combination is a problem. > may be, the scheme should start cycling with the first chain in the file > regardless whether it is called :A or :H My understanding is that in some areas they have 'conventions' which generally use the same chain identifier. Therefore, I felt it was best to consistently use the same color for the same chain identifier. The exact colors can be changed. In this case, clearly the two shades need to be more widely separated. Note that the HETATM chain colors are currently not correct ... they need to be a shade which is different from the ATOMs that are in the same chain. Miguel > Regards, Jan > > <http://www.imb-jena.de/cgi-bin/SCOPlnk.exe?ASK=1dsf&MODEL=&JMOL=SITEH&AVAIL=P&ALTCODE=&PARAMNR=1&TITLE=Jmol%201dsf> > > > > ------------------------------------------------------- > This SF.net email is sponsored by: The Robotic Monkeys at ThinkGeek > For a limited time only, get FREE Ground shipping on all orders of $35 > or more. Hurry up and shop folks, this offer expires April 30th! > http://www.thinkgeek.com/freeshipping/?cpg=12297 > _______________________________________________ > Jmol-users mailing list > [EMAIL PROTECTED] > https://lists.sourceforge.net/lists/listinfo/jmol-users > -------------------------------------------------- Miguel Howard [EMAIL PROTECTED] c/Pe�a Primera 11-13 esc dcha 6B 37002 Salamanca Espa�a Spain -------------------------------------------------- telefono casa 923 27 10 82 movil 650 52 54 58 -------------------------------------------------- To call from the US dial 9:00 am Pacific US = home 011 34 923 27 10 82 12:00 noon Eastern US = cell 011 34 650 52 54 58 6:00 pm Spain -------------------------------------------------- ------------------------------------------------------- This SF.net email is sponsored by: The Robotic Monkeys at ThinkGeek For a limited time only, get FREE Ground shipping on all orders of $35 or more. Hurry up and shop folks, this offer expires April 30th! http://www.thinkgeek.com/freeshipping/?cpg297 _______________________________________________ Jmol-users mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-users
