In the announcement message for Jmol v10pre9 I forgot to mention something
of interest.
The popup menu is now context sensitive in two areas.
1. Select -> by Element -> {element list}
Now lists all and only the elements that are actually present in the
loaded file.
2. Select -> by Residue -> {residue list}
Now restricts to the subset of amino acid group identifiers actually
present in the loaded file. This includes the 20 standard amino acids plus
ASX (ASP/ASN ambiguous) and GLX (GLU/GLN ambiguous)
Note that I have not yet added anything special for other groups that may
be present in the file.
Suggestions appreciated.
some thoughts:
- presumably, we should add some *other* entries to the menu.
- there is already code for detecting things that are in an amino-acid
chain but have non-standard group identifiers. (modified-residues?)
Should these be treated specially in the menus?
- the same goes for nucleotide bases
Miguel
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