On Thu, February 24, 2005 8:49 am, Frieda S. Reichsman said:
>
> On Feb 23, 2005, at 10:43 AM, Miguel wrote:
>>>> Q: Frieda, remind me once again what you are trying to accomplish ...
>>>
>>> I usually fade out sections of a macromolecule to focus on one part,
>>> and ideally I want that one part to move to the center of the applet
>>> in
>>> a centered fashion, not as if the rest of the molecule were still
>>> there. (Which it is of course but it is unseen).
>>>
>>> In other words, I use a Chime move (or in Jmol moveTo) command to
>>> smoothly bring the remaining section of the molecule to where I want
>>> it
>>> - usually in the center of the applet, with the relevant "face" of the
>>> section shown to the viewer-- the rotations that occur in this move
>>> revolve around the new center, not the whole molecule.

Perhaps I'm missing something but couldn't this appearance be done by
having two models which are positioned independently while one or the
other is invisible and then the two are faded out/in simultaneously? Since
Frieda is pre-determining the views and which parts to include it seems
that all of this would work. I can see that having the user move things
around and then ask for "focus" on some portion of the molecule would
cause problems. But...

Rich


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