to PUBLISH these as PDB files, it's no big deal. I think it's a great idea
to do it just the way you do. It saves loads of space.
A comment in the header might be nice that indicates which residue is being modeled and how many models there are. Then you could use "show pdbheader" at the end of the applet script parameter to grab that information on the fly. All you would need is the PDB file itself to produce the whole page. There are lots of interesting things you could do with the header that could be helpful.
Bob
Joost Van Durme wrote:
OK, so MODEL/ENDMDL, although its use violates standard PDB format, is the way to go. Here's an attempt at animation using select and NOT using restrict:
http://www.stolaf.edu/people/hansonr/jmol/test/test_jmol1.html
Fun!
Beautiful animation, Bob! I might implement this on my site when I have all the essentials finished. However, I don't understand where I violate PDB rules here. But anyway, Jmol does exactly what I want, so I'm happy with it. :)
Q: what's up with the translucent atoms Egon whas talking about? Is this implemented in Jmol?
Joost
--
Robert M. Hanson, [EMAIL PROTECTED], 507-646-3107 Professor of Chemistry,
St. Olaf College 1520 St. Olaf Ave., Northfield, MN 55057 mailto:[EMAIL PROTECTED] http://www.stolaf.edu/people/hansonr
"Imagination is more important than knowledge." - Albert Einstein
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