De: Timothy Driscoll <[EMAIL PROTECTED]>
>
>hi all,
>
>in case anyone is interested:
>
>I just came across a protein sequence alignment tool called PFAAT  
>(<http://pfaat.sourceforge.net/>).  this software uses Jmol as an  
>inline structure visualization module.  it looks pretty cool, and I  
>can see great possibilities in the combination. (displaying aligned  
>3D structures, coloring 3D structure by alignment score, etc.)

Thanks for the link :)
You should add it in the Jmol wiki at 
http://wiki.jmol.org/ApplicationsEmbeddingJmol

Nico



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