Hi
As I am trying to convert various chime/rasmol scripts to jmol, I am
running into a problem:
I am predominantly working with antibody structures, which usually
use the Kabat convention
for residue numbering in the PDB files, and thus rely on the residue
insertion code, eg.
Residue number 95a:L, 95b:L ..., 100a:H, 100b:H, 100c:H.. to identify
the residues in
the variable length loops of the different chains. These scripts
fail in jmol, which appears not to understand residue
numbers such as 100a or 100A. Is there any other way to access column
27 of the PDB record
when specifying an atom/ residue selection in jmol?
Annemarie
________________________________________________________
Dr. Annemarie Honegger, Ph.D.
Zürich University, Dept. of Biochemistry
Winterthurerstr.190
CH-8057 Zürich
Switzerland
e-mail: [EMAIL PROTECTED]
Tel.: 41-44-635 55 62
Fax: 41-44-635 57 12
URL: http://www.biochem.unizh.ch/antibody
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