OK, you're on track. Check that file from the machine that is causing the problem. When you go to that exact URL with that browser, do you get a login message from the server? When I go there, I get a log in screen. Ah, so I'm betting only one of your browsers is passing on the secure password to the server when Jmol makes that call. Something like that. I'm going to change this error message to display the first 1000 characters of the file. That should be very helpful in general. Yes, ok, that's done. Jmol 11.1.12 will have this feature. When you look in the log file you will see the first three lines of the file. Also, this will display in the applet window. (a feature of 11.1)
Bob Jeff Hansen wrote: > Thanks for your help Bob. I went to Console.app and checked out the > Java log and found the following. > > org.jmol.applet.Jmol load time = 2 seconds > FileManager.openFile(../../file.php/11/1a3n.pdb) > SmarterJmolAdapter:The Resolver thinks:null > error opening http://moodle.depauw.edu/file.php/11/1a3n.pdb > unrecognized file format > openFile(../../file.php/11/1a3n.pdb) 1202 ms > > This is pretty much what Dean found earlier. As he mentioned, this > seems to be a Firefox on OS X issue only. > > > Jeff > > >> This is usually an indication that your server is not properly finding >> the files. It's a directory issue. Be sure to open the Java contol panel >> -- argh on a Mac -- ah, look at the Java log in the System logs >> folder -- and see what it is telling you. It will say something like >> "file not found -- JmolApplet.jar" or something like that. Then we >> could know what >> "loads the applet just fine" means. Be sure to try on a PC as well using >> Firefox. >> >> Bob >> >> >> >> Jeff Hansen wrote: >> >> >>> My university is currently trying Moodle as an alternative to >>> Blackboard for a Course Management System. One of the things I like >>> about Moodle is that it supports Jmol. However, we have had some >>> problems so far. I have put a couple of Jmol pages on my Moodle >>> site. I am able to view the molecules just fine in Safari but not in >>> Firefox (Mac OS X 10.4.8). In Firefox, it loads the applet just fine >>> but fails to load the molecule. I get a black box which, when I >>> control click, gives the pop-up menu which indicates no atoms are >>> loaded. We are using Jmol 10.2. I have asked them to switch to 11.0, >>> but it hasn't happened yet. If anyone has any suggestions about what >>> is going wrong that I could forward to our Moodle site administrator I >>> would really appreciate it. I haven't yet had the chance to test on >>> any other systems so I don't know how it behave there. >>> >>> Thanks. >> >> > ***************************** > Jeff Hansen > Department of Chemistry > DePauw University > Greencastle, IN 46135 > [EMAIL PROTECTED] <mailto:[EMAIL PROTECTED]> > ***************************** > > >------------------------------------------------------------------------ > >------------------------------------------------------------------------- >Take Surveys. Earn Cash. Influence the Future of IT >Join SourceForge.net's Techsay panel and you'll get the chance to share your >opinions on IT & business topics through brief surveys-and earn cash >http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV > >------------------------------------------------------------------------ > >_______________________________________________ >Jmol-users mailing list >[email protected] >https://lists.sourceforge.net/lists/listinfo/jmol-users > > ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
