select ... color atoms property partialcharge absolute -0.1 0.2 You will want to use an absolute scale so that you can reproduce the same numbers. You can use labels instead, or some combination. I'm working on being able to color the label backgrounds by a property...
Bob Hatuey wrote: >Hello Angel, > >That is really interesting. > >Well, I suppose that I have to create a file with a line of atoms, OK? >Then load the structure and then map the electrostatic potential value >to the color of atoms, right? >How do I map the electrostatic potential value to the atoms color? > >Regards, > >Hatuey > >On 8/28/07, Angel Herraez <[EMAIL PROTECTED]> wrote: > > >>Hello >>I'm not answering how to get the surface rendered and colored, just the >>colored bar idea. >>You could do something by loading into Jmol a fake model which has >>several vertically aligned atoms and color it according to values given by >>script or in the file itself. I did something similar to test rainbow >>patterns and >>gave rise to a model whose screenshot you can see at >>http://jmol.sourceforge.net/jscolors/index.en.html#Gradients >> >>Remember you can load the auxiliary file together with yours, e.g. using >>"load append" >> >> > >------------------------------------------------------------------------- >This SF.net email is sponsored by: Splunk Inc. >Still grepping through log files to find problems? Stop. >Now Search log events and configuration files using AJAX and a browser. >Download your FREE copy of Splunk now >> http://get.splunk.com/ >_______________________________________________ >Jmol-users mailing list >[email protected] >https://lists.sourceforge.net/lists/listinfo/jmol-users > > -- Robert M. Hanson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 ------------------------------------------------------------------------- This SF.net email is sponsored by: Splunk Inc. Still grepping through log files to find problems? Stop. Now Search log events and configuration files using AJAX and a browser. Download your FREE copy of Splunk now >> http://get.splunk.com/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
