Well, I'm Ok with any turn-around-the problem fix, and I had already figured 
out another 
one: define my Hbond and delete all N-O Hbonds every time.

But...

On 7 Nov 2007 at 15:01, Bob Hanson wrote:
> This is there to recreate the hydrogen bonds if they have been 
> calculated for one conformation, and then another is displayed. 

I had NOT invoked calculation of Hbonds. Why should they be calculated when 
changing 
between conformations?


> The solution is to use
> 
> connect (159.O%A) (162.H%A) partial 1.1
> 
> This makes a bond that Looks like a hydrogen bond, but is really a partial 
> bond. 

Thanks!



-------------------------------------------------------------------------
This SF.net email is sponsored by: Splunk Inc.
Still grepping through log files to find problems?  Stop.
Now Search log events and configuration files using AJAX and a browser.
Download your FREE copy of Splunk now >> http://get.splunk.com/
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users

Reply via email to