Eran Hodis wrote: > Does the PDB file 2hyn load in Jmol for anyone? It is an NMR model with 184 > structures...
On Linux with Java 1.4.2_13 there were needed about 1 GB of memory to load '2hyn' into the Jmol application (version 11.5.35). So I think you should have at least 2 GB main memory (RAM) available. And you have to increase the maximum heap size for example to ~1.2 GB with the option '-Xmx1260m'. On Linux you can just enter it in the command-line: java -Xmx1260m -jar Jmol.jar On Windows you can configure this in the Java settings. But it various with the Java version were you can enter the options for the application. Those for the applet are set independantly. You can see two pictures of '2hyn' (first model, all models) that were automatically generated with Jmol on our JenaLib atlas page for '2hyn': http://www.fli-leibniz.de/cgi-bin/ImgLib.pl?CODE=2hyn (The manually generated picture was made with Pymol.) Regards, Rolf ------------------------------------------------------------------------- Check out the new SourceForge.net Marketplace. It's the best place to buy or sell services for just about anything Open Source. http://sourceforge.net/services/buy/index.php _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
