Chuck, I'd say that is correct.
The major difference is: anything defined using SET is a global property for
Jmol, which in
general will apply to all the pertaining objects (but sometimes, as the
measurement color,
only to the subsequent instances of those objects).
On the other hand, things like atom and bond size, labels, etc are properties
associated with
particular atoms, so they are set individually per selected atom set.
An exception in your phrasing may be "bonds on" which I gather is a global
setting too.
BTW, Jmol 11.6+ does not accept "bonds on" any longer (a remnant from
RasMol/Chime
compatibility), requiring either "set bonds on" or the recommended "set
showMultipleBonds
on"
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