Hello, Vincent > I'm planing to integrate JMol to my application to view PDB files and > ligand pockets. Basically, my pockets will be represented by several > spheres placed in the structure (input as PQR format)
You can read PQR files into Jmol without problem, can't you? > My question would be: is there any way to get the Jmol popup menu that > one get when right clicking on the desktop version of Jmol ? I'm not sure I understand you fully. The applet has the same popup menu as the application, except for file operations (due to Java security restraints). You can use the signed applet to have those too. Ah, I see. You mean having the menu in your custom application. I cannot help on that. > And more generally, what is the best and most recent place to learn > how to integrate Jmol into an application? I'm currently using > Biojava's examples, and I've checked the Jmol wiki here: > http://wiki.jmol.org/index.php?title=Applications_Embedding_Jmol Don't think there's any doc for that.Maybe others that have development experience can help you there. Good luck! ------------------------------------------------------------------------------ Come build with us! The BlackBerry® Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9-12, 2009. Register now! http://p.sf.net/sfu/devconf _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users

