On 01/07/2010 04:10 AM, Andy Lu wrote: > Hi, I am using JMol script within my java application. > > I got the select function to work, but how would I go about for invert > Selection? It's not working for me. For this purpose you can use the predefined atom set "selected". This set contains all currently selected atoms. So the command would be:
select not selected Because the "select" command always unselects all atoms that are not selected by the provided selection expression, the previously selected atoms are deselected. This way you get the desired inversion. Similarly, if you want to add atoms to the current selection, you must include "selected" in your selection expression, e.g.: select selected OR protein For details on atom expressions and selections please look at the interactive scripting documentation: http://www.imb-jena.de/ImgLibPDB/Jena3D/doc/jmol_scripting/index.htm#atomexpressions http://www.imb-jena.de/ImgLibPDB/Jena3D/doc/jmol_scripting/index.htm#select > Also how do I make the selected residues of "Style" --> "Theme"-->"Trace" > from the script? The command is: trace on See the documentation at http://www.imb-jena.de/ImgLibPDB/Jena3D/doc/jmol_scripting/index.htm#trace for details. Regards, Rolf ------------------------------------------------------------------------------ This SF.Net email is sponsored by the Verizon Developer Community Take advantage of Verizon's best-in-class app development support A streamlined, 14 day to market process makes app distribution fast and easy Join now and get one step closer to millions of Verizon customers http://p.sf.net/sfu/verizon-dev2dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
