Hi all, I saw this interesting question on the CCL mailing list:
On Tue, Mar 2, 2010 at 9:55 PM, Anthony F wrote: > My next question is on visualizing my XYZ files. I have used Avogadro, VMD, > and Gabedit. But I want to make diagrams like these: > > http://bhgroup.lsa.umich.edu/files/u1/ge-prop-ortep.gif > > I prefer how the ellipsoids have the 3D effect and that everything is in > black and white. I don't like how bonds have two different colors in Avogadro > and VMD. There is a nice tutorial by the IUCR that shows how ORTEP diagrams can be used: http://journals.iucr.org/services/help/jtkt/7.html And I know the scripting language can be used to change the colors of atoms and bonds... But that would not cover a border around atoms and bonds, I guess, so that we can make them all white-on-white... Has someone tried to make black-and-white ORTEP diagrams with Jmol? Kind regards, Egon -- Post-doc @ Uppsala University Proteochemometrics / Bioclipse Group of Prof. Jarl Wikberg Homepage: http://egonw.github.com/ Blog: http://chem-bla-ics.blogspot.com/ PubList: http://www.citeulike.org/user/egonw/tag/papers ------------------------------------------------------------------------------ Download Intel® Parallel Studio Eval Try the new software tools for yourself. Speed compiling, find bugs proactively, and fine-tune applications for parallel performance. See why Intel Parallel Studio got high marks during beta. http://p.sf.net/sfu/intel-sw-dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
