Hi Bob et al,
First upgrade to 12.0.RC23 or 12.0.RC24...
Did that although the version from your site and the Sourceforge site report
"unknown version".
On Fri, Jul 9, 2010 at 9:43 AM, Greeves, Nick
<ngree...@liverpool.ac.uk<mailto:ngree...@liverpool.ac.uk>>wrote:
Hi All,
I note that there have been some changes to the way hbonds behave recently
and I wonder if they are responsible for this unexpected behaviour.
This animation works fine if you play it to the end by using the Jmol menu
(Animation Play). At the end there is no hydrogen bond between the epoxide
that is formed and the carboxylic acid. What is odd is when the More
Controls button is clicked the structure loads with an extra wireframe
hbond! As this is just using the state I don't understand how this can
happen.
http://138.253.125.24/~ng/suzanna/Diastereoselectivity%20epoxidation.html<http://138.253.125.24/%7Eng/suzanna/Diastereoselectivity+epoxidation.html<http://138.253.125.24/~ng/suzanna/Diastereoselectivity+epoxidation.html>>
(unfinished
page ignore text and schemes!)
How can we stop this rogue H-bond from appearing?
example shown is a bromination
I did say the page was unfinished and to ignore the text and diagrams ;-)
The page looks better now - still not finished though. But the rogue hydrogen
bond keeps on appearing in the More Controls window when the animation has run.
The same effect can be produced by "get state" and then Run in the main window
applet.
http://138.253.125.24/~ng/suzanna/diastereoselectivity epoxidation MAJOR.html
All the best
Nick
--
3D Organic Animations http://www.chemtube3d.com
Tel: +44 (0)151-794-3506 (3500 secretary)
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