Bob,
The image file (gif) loads directly to any page using an image tag with
the Resolver's url as the image src. Although it's dynamically generated
from the query string, ii's simply a gif image. Anyone can load it. No
problem.
With the JME file, I'm still on an embedded JME Editor train of thought.
Since the Resolver returns a JME file that retains the stereochemistry
of the submitted Jmol model, it can be input into JME to give a correct
wedge bond drawaing of the model in the Jmol window. JME will not read a
served file, so Jmol has to call the Resolver for the JME file and then
give it to JME Editor via JavaScript.
Maybe I just answered my own question! Is the above legal with the
signed applet? If you're using the signed applet, can you use AJAX to
put the Resolver returned JME string into a JavaScript variable?
Quick unrelated question: Is the following the correct syntax for
swapping in a new set of partial charges??
var x = Array(partialChargesAsCommaDelimetdStrings)
{*).partialCharge = {*}.partialCharge.x
Otis
Otis Rothenberger
chemagic.com
On 9/4/2010 8:37 PM, Robert Hanson wrote:
On Fri, Sep 3, 2010 at 3:02 PM, Otis Rothenberger
<osrot...@chemagic.com <mailto:osrot...@chemagic.com>> wrote:
This is an outgrowth of the gif image note, but its a new subject.
So new chain...
Here's a true Jmol depict - i.e. Jmol model kit mode 3D --> JME
stereo 2D
http://chemagic.com/web_molecules/script_page_large.aspx
Click The Molecular Editor link; Click the Draw link. Click the
Depict link;
The appropriate query to NIH Resolver is:
http://cactus.nci.nih.gov/chemical/structure/CCC(C)CC/file?format=jme
<http://cactus.nci.nih.gov/chemical/structure/CCC%28C%29CC/file?format=jme>
Bob, is this one worth building into Jmol like the Resolver
molfile load? If it's built into Jmol, them users embedding JME
should be able to use it with the signed Jmol applet sans server
side programming.
You lost me there...
Unless JME has a signed applet version, I don't think you can pass
the Resolver data directly to JME. If the JME file comes into a
Jmol/JME combined page via Jmol, my guess is that it's legal for
the signed Jmol applet to pass the data to JME via JavaScript???
Are you interested in processing the PNG/JPG image coming from NIH or
just the JME string?
Otis
--
Otis Rothenberger
chemagic.com <http://chemagic.com>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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