On 12/10/2010 13:02, Robert Hanson wrote:
> Ah, yes. Forgot to mention that. There's a new atom property called
> "substructure" :
>
> print {*.ca}.substructure.all # numbers 0 through 8
> select substructure=7 # just the 3/10 helices
> select {*.ca}; label %[substructure] # words "helix", "helix310",
> "helixpi"
>
<snip> great - I should have dug deeper!
> (note the happy coincidence of 7 8 9 being the ordinals of the letters
> G H I)
how strange ;)
<snip>
> Jim, are you using 12.1 or 12.0 in jalview? If 12.0, that's a reason I
> could give to add this to 12.0. I think it really is a
> "version-number" changer, and I think it would be good to have it in
> "Jmol 12" not just "Jmol 12.1".
I shipped 12.1 with Jalview 2.6 because of the Jmol console refactoring
you did back in August, which was essential for the series 12
incorporation into Jalview. I can revert to 12.0 if the console API
changes have been incorporated (but I didn't think that would happen),
which would be safer, but I'm also happy to keep step with 12.1, now
that updating is pretty much a matter of dropping the next 12.1 binary
release in the correct place in the Jalview distribution, so I'm not
sure you can use Jalview as a reason to add the feature in to Jmol 12.0
yet (particularly since I probably won't be adding the dssp annottion
extraction until late this year).
Jim.
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