Hi Pino The cyclohexane is my "favourite" example where the Jmol minimization routine fails. It systematically gives a planar ring. But I think it is the only case (too symmetric a molecule must be a local energy minimum). All other molecules I've tried work.
I have found 2 solutions: 1. move one of the atoms (I do in in JChemPaint, may or not be possible in JME) so the hexagon is not perfect. 2. activate the "dragminimize" option in Jmol and move one of the atoms with the mouse. ------------------------------------------------------------------------------ Nokia and AT&T present the 2010 Calling All Innovators-North America contest Create new apps & games for the Nokia N8 for consumers in U.S. and Canada $10 million total in prizes - $4M cash, 500 devices, nearly $6M in marketing Develop with Nokia Qt SDK, Web Runtime, or Java and Publish to Ovi Store http://p.sf.net/sfu/nokia-dev2dev _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
