Hi Nico, On Tue, Nov 23, 2010 at 12:23 AM, Nicolas Vervelle <[email protected]> wrote: > For example, I know CML which can have a root element of type > "http://www.xml-cml.org/schema/cml2/core:molecule";. > Can CML have an other kind of root element ?
Yes. Many, actually. Conventions define in more detail the exact structure of a CML document. Likely candidates are <cml> and <list>. Jmol used to recognize conventions, and adapt it's reading accordingly. See my 2001 paper where I described the approach I used in Jmol and JChemPaint in 1999 or so. (I think there is a different CML reader nowadays.) See: http://www.citeulike.org/user/egonw/article/1375509 > What is the MIME type for CML files ? I would use the CML specific one, preferably, which would make things in MediaWiki much easier. > What other XML formats exist and what are their root element ? PubChem has XML formats (the CDK has LGPL readers, which could be used as starting point). And I heard the Molecular Networks is brewing on something... MDL^WSymyx formats also come in an XML flavor, but mostly just wrap the existing non-CML molfile blocks, IIRC. Not looked at it recently. Egon -- Dr E.L. Willighagen Postdoctoral Research Associate University of Cambridge Homepage: http://egonw.github.com/ LinkedIn: http://se.linkedin.com/in/egonw Blog: http://chem-bla-ics.blogspot.com/ PubList: http://www.citeulike.org/user/egonw/tag/papers ------------------------------------------------------------------------------ Increase Visibility of Your 3D Game App & Earn a Chance To Win $500! Tap into the largest installed PC base & get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
