Try updating to Firefox 4.0 if you have not yet done so.  On the Mac this was a 
problem with the interaction of the previous version of Firefox with java when 
a structure was reloaded.   That is, I have a program that randomly chooses the 
structure to load; it it had been previous loaded, I got this error.   Firefox 
4 fixed it.


On May 10, 2011, at 2:33 PM, Marcey, David wrote:

> Sorry for not including that info...
> 
> On all: 1) Mac snow leopard; 2) Windows 7, 64 bit SP1; 3) Windows XP, SP2. 
> 
> Browser=Firefox.
> 
> URL to try: 
> http://www.callutheran.edu/Academic_Programs/Departments/BioDev/omm/jmol/dna/dna.html
> 
> After loading and using one of the buttons in the first section, SOMETIMES a 
> button in the second section will yield the error. Very odd.
> 
> Thanks in  advance for any advice.
> 
> 
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> David J. Marcey
> Fletcher Jones Professor
>     of Developmental Biology
> CLU, 60 West Olsen Road., MC#3700
> Thousand Oaks, CA  91360
> ~~~~~~~~~~~~~~~~~~
> [email protected]
> ph: 805-493-3263
> fax: 805-493-3392
> ~~~~~~~~~~~~~~~~~~
> The Online Macromolecular Museum:
> www.clunet.edu/BioDev/omm/gallery.htm
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> ________________________________________
> From: Philip Bays [[email protected]]
> Sent: Tuesday, May 10, 2011 10:46 AM
> To: [email protected]
> Subject: Re: [Jmol-users] serving pdbs: new error?
> 
> What platform??
> 
> On May 10, 2011, at 1:34 PM, Marcey, David wrote:
> 
>> I have a question concerning the serving of pdbs. Occasionally, and ONLY 
>> occasionally, I receive the following error when trying to load or reload a 
>> pdb in a webpage:
>> 
>> "java.security.AccessControlException: access denied 
>> (java.net.socketpermission [IP address:port#] connect,resolve)"
>> 
>> I have heard that this may be an issue with newer versions of Java. I'm 
>> using 1.6.0_25-b06.
>> 
>> I am using the unsigned Jmol applet, serving pdbs from the same domain as 
>> the applet.
>> 
>> Thanks,
>> David
>> 
>> 
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>> David J. Marcey
>> Fletcher Jones Professor
>> of Developmental Biology
>> CLU, 60 West Olsen Road., MC#3700
>> Thousand Oaks, CA  91360
>> ~~~~~~~~~~~~~~~~~~
>> [email protected]
>> ph: 805-493-3263
>> fax: 805-493-3392
>> ~~~~~~~~~~~~~~~~~~
>> The Online Macromolecular Museum:
>> www.clunet.edu/BioDev/omm/gallery.htm
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>> ------------------------------------------------------------------------------
>> Achieve unprecedented app performance and reliability
>> What every C/C++ and Fortran developer should know.
>> Learn how Intel has extended the reach of its next-generation tools
>> to help boost performance applications - inlcuding clusters.
>> http://p.sf.net/sfu/intel-dev2devmay
>> _______________________________________________
>> Jmol-users mailing list
>> [email protected]
>> https://lists.sourceforge.net/lists/listinfo/jmol-users
> 
> J. Philip Bays
> Professor of Chemistry
> Department of Chemistry and Physics
> Saint Mary's College
> Notre Dame, IN 46556
> [email protected]
> 
> 
> 
> 
> 
> ------------------------------------------------------------------------------
> Achieve unprecedented app performance and reliability
> What every C/C++ and Fortran developer should know.
> Learn how Intel has extended the reach of its next-generation tools
> to help boost performance applications - inlcuding clusters.
> http://p.sf.net/sfu/intel-dev2devmay
> _______________________________________________
> Jmol-users mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-users
> 
> ------------------------------------------------------------------------------
> Achieve unprecedented app performance and reliability
> What every C/C++ and Fortran developer should know.
> Learn how Intel has extended the reach of its next-generation tools
> to help boost performance applications - inlcuding clusters.
> http://p.sf.net/sfu/intel-dev2devmay
> _______________________________________________
> Jmol-users mailing list
> [email protected]
> https://lists.sourceforge.net/lists/listinfo/jmol-users

J. Philip Bays
Professor of Chemistry
Department of Chemistry and Physics
Saint Mary's College
Notre Dame, IN 46556
[email protected]





------------------------------------------------------------------------------
Achieve unprecedented app performance and reliability
What every C/C++ and Fortran developer should know.
Learn how Intel has extended the reach of its next-generation tools
to help boost performance applications - inlcuding clusters.
http://p.sf.net/sfu/intel-dev2devmay
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