For educational purposes I've written a pdb file containing 8 atoms (simple cubic lattice) and 12 bonds. I've loaded it in jmol and all 12 bonds are shown. When I've loaded the same file using Jmol embedded into a web page all possible bonds between all atoms are shown.
I know that it happens when bond information is not written (or in a wrong format) or when the number of bonds is less than the number of atoms in the model. In this case Jmol assumes that it should draw the bonds using one of its internal connection algorithms. However, in this case it seems not to be the case. Any suggestions? Best regards, Pavel ------------------------------------------------------------------------------ AppSumo Presents a FREE Video for the SourceForge Community by Eric Ries, the creator of the Lean Startup Methodology on "Lean Startup Secrets Revealed." This video shows you how to validate your ideas, optimize your ideas and identify your business strategy. http://p.sf.net/sfu/appsumosfdev2dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
