Hello Pavel I can imagine no reason for Jmol application and applet to behave differently.
1. Are they the same version? 2. You can disable autobonding using a command (although that should affect both app and applet). That command can go in the page source or in the pdb file itself http://chemapps.stolaf.edu/jmol/docs/#set_autobond http://wiki.jmol.org/index.php/File_formats/Scripting#Script_inline_wi thin_a_molecular_coordinates_file 3. If you share the file or the url, I'll gladly have a look at it 4. finally, you could draw lines between atoms instead of using bonds ------------------------------------------------------------------------------ AppSumo Presents a FREE Video for the SourceForge Community by Eric Ries, the creator of the Lean Startup Methodology on "Lean Startup Secrets Revealed." This video shows you how to validate your ideas, optimize your ideas and identify your business strategy. http://p.sf.net/sfu/appsumosfdev2dev _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
